GSRI
Bioc currentGene Set Regulation Index
Release Lineage
Entered 2.6 · Apr 23, 2010
Current · Requires R 4.6
Description
The GSRI package estimates the number of differentially expressed genes in gene sets, utilizing the concept of the Gene Set Regulation Index (GSRI).
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
8 2 exported
Complexity
3 avg / 14 max
Call network
8 nodes / 4 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,720
Files
26
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
2
Internal functions
6
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
11.1%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.14.2
System requirements
–
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
33
First release
2010-04-22
Latest release
2026-04-28
Avg cadence
183 days
Cold removal rate
100%
Dep drift
5
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 33%
- Documented parameters
- 83%
- Return-value docs
- 100%
- References docs
- 20%
Topics
People
Julian Gehring
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("GSRI")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.