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DeeDeeExperiment

Bioc current

DeeDeeExperiment: An S4 Class for managing and exploring omics analysis results

v1.2.0 · software · MIT + file LICENSE
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Release Lineage

Entered 3.22 · Oct 30, 2025

Current · Requires R 4.6

1.0 In 2 of 49 releases 3.23

Description

DeeDeeExperiment is an S4 class extending the SingleCellExperiment class, designed to integrate and manage omics analysis results. It introduces two dedicated slots to store Differential Expression Analysis (DEA) results and Functional Enrichment Analysis (FEA) results, providing a structured approach for downstream analysis.

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Topics

Software
Software › Infrastructure
Software › Infrastructure › DataRepresentation
Software › AssayDomain › GeneExpression
Software › AssayDomain › Transcription
Software › ResearchField › Transcriptomics
Software › BiologicalQuestion › DifferentialExpression
Software › WorkflowStep › Pathways
Software › WorkflowStep › Pathways › GO

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