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CytoTree

Bioc removed

A Toolkit for Flow And Mass Cytometry Data

v1.8.0 · GPL-3

Release Lineage

Entered 3.12 · Oct 28, 2020

Removed after 3.16 · Nov 2, 2022

1.0 In 5 of 49 releases 3.23

Description

A trajectory inference toolkit for flow and mass cytometry data. CytoTree is a valuable tool to build a tree-shaped trajectory using flow and mass cytometry data. The application of CytoTree ranges from clustering and dimensionality reduction to trajectory reconstruction and pseudotime estimation. It offers complete analyzing workflow for flow and mass cytometry data.

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Cite

Cite this package

Run in R for the authors' preferred citation:

citation("CytoTree")
Dai, Y. (2022). CytoTree: A Toolkit for Flow And Mass Cytometry Data (Version 1.8.0) [Computer software]. https://bioconductor.org/packages/CytoTree

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CytoTree version 1.8.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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