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CytoTree

Bioc removed

A Toolkit for Flow And Mass Cytometry Data

v1.8.0 · GPL-3
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Release Lineage

Entered 3.12 · Oct 28, 2020

Removed after 3.16 · Nov 2, 2022

1.0 In 5 of 49 releases 3.23

Description

A trajectory inference toolkit for flow and mass cytometry data. CytoTree is a valuable tool to build a tree-shaped trajectory using flow and mass cytometry data. The application of CytoTree ranges from clustering and dimensionality reduction to trajectory reconstruction and pseudotime estimation. It offers complete analyzing workflow for flow and mass cytometry data.

Code & tests

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Code

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Topics

Software › ResearchField › CellBiology
Software › StatisticalMethod › Clustering
Software › WorkflowStep › Visualization
Software
Software › AssayDomain › CellBasedAssays
Software › Technology › FlowCytometry
Software › BiologicalQuestion › NetworkInference
Software › WorkflowStep › Visualization › Network

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