CNORode
Bioc currentODE add-on to CellNOptR
Release Lineage
Entered 2.11 · Oct 3, 2012
Current · Requires R 4.6
Description
Logic based ordinary differential equation (ODE) add-on to CellNOptR.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
527 19 exported
Complexity
6 avg / 26 max
Call network
527 nodes / 891 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
39,270
Files
156
Compiled share
89.5%
Has compiled src
Yes
Language breakdown
API
Exported functions
19
Internal functions
2
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
Yes
CI type
["travis"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL-2
License flags
SPDX valid, OSI approved
History
Versions
28
First release
2012-10-01
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
2
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 79%
- Documented parameters
- 98%
- Return-value docs
- 95%
- References docs
- 4%
Datasets
| Name | Class | Rows × Cols | Also in |
|---|---|---|---|
| ToyModelMMB_FeedbackAnd | data.frame | 18 × 19 | No other package |
| cnodata | – | – | – |
| cnolist | – | – | – |
| cnolistCNORodeExample | list | – | No other package |
| indices | list | – | No other package |
| model | list | – | No other package |
| pknmodel | list | – | 3 packages |
Topics
Depended on by (1)
Bioconductor (1)
People
- Aurelien Dugourd maintainer
- Thomas Cokelaer author
- Federica Eduati contributor
- Attila Gabor contributor
- Enio Gjerga contributor
- David Henriques author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("CNORode")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.