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MEIGOR

Bioc current

MEIGOR - MEtaheuristics for bIoinformatics Global Optimization

v1.46.0 · software · GPL-3
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.0 · Oct 14, 2014

Current · Requires R 4.6

1.0 In 24 of 49 releases 3.23

Description

MEIGOR provides a comprehensive environment for performing global optimization tasks in bioinformatics and systems biology. It leverages advanced metaheuristic algorithms to efficiently search the solution space and is specifically tailored to handle the complexity and high-dimensionality of biological datasets. This package supports various optimization routines and is integrated with Bioconductor's infrastructure for a seamless analysis workflow.

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

58 8 exported

Complexity

7.9 avg / 119 max

Call network

58 nodes / 57 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Call graph

Open call graph →
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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

8,958

Files

107

Compiled share

0%

Has compiled src

No

Language breakdown

R 5,982 (66.8%)Docs 1,494 (16.7%)Vignettes 1,482 (16.5%)

API

Exported functions

8

Internal functions

34

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

–

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.0

System requirements

–

C++ standard

–

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

24

First release

2014-10-13

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.0: 49,107 LOCv3.1: 49,108 LOCv3.2: 49,108 LOCv3.3: 49,108 LOCv3.4: 49,108 LOCv3.5: 49,108 LOCv3.6: 49,108 LOCv3.7: 49,108 LOCv3.8: 49,109 LOCv3.9: 49,109 LOCv3.10: 49,109 LOCv3.11: 49,964 LOCv3.12: 49,964 LOCv3.13: 49,964 LOCv3.14: 49,964 LOCv3.15: 49,964 LOCv3.16: 49,964 LOCv3.17: 49,964 LOCv3.18: 8,957 LOCv3.19: 8,958 LOCv3.20: 8,958 LOCv3.21: 8,958 LOCv3.22: 8,958 LOCv3.23: 8,958 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
93%
Return-value docs
75%
References docs
8%

Topics

Software › ResearchField › SystemsBiology
Optimization
Software

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