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BiocPkgDash

Bioc current

An interactive Shiny dashboard for Bioconductor package maintainers

v1.0.0 · software · Artistic-2.0

Release Lineage

Entered 3.23 · Apr 29, 2026

Current · Requires R 4.6

1.0 In 1 of 49 releases 3.23

Description

This package provides an interactive Shiny dashboard for Bioconductor package maintainers. It visualizes various package statuses, metadata, and development metrics, offering insights into package health and activity. This tool aims to support maintainers of multiple packages by filtering packages via maintainer email.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

49 3 exported

Complexity

1.9 avg / 10 max

Call network

49 nodes / 55 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,887

Files

41

Compiled share

0%

Has compiled src

No

Language breakdown

R 1,588 (84.2%)Tests 3 (0.2%)Docs 132 (7%)Vignettes 164 (8.7%)

API

Exported functions

3

Internal functions

45

Recent export changes

v3.23+3 BiocPkgDash, pkgStatusPlot, pkgStatusTable

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

5%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.6.0

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

1

First release

2026-04-28

Latest release

2026-04-28

Avg cadence

Cold removal rate

Dep drift

0

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 679 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BiocPkgDash")
Ramos, M., & Carey, V. (2026). BiocPkgDash: An interactive Shiny dashboard for Bioconductor package maintainers (Version 1.0.0) [Computer software]. https://bioconductor.org/packages/BiocPkgDash

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BiocPkgDash version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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