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BicARE

Bioc current

Biclustering Analysis and Results Exploration

v1.70.0 · software · GPL-2

Release Lineage

Entered 2.3 · Oct 22, 2008

Current · Requires R 4.6

1.0 In 36 of 49 releases 3.23

Description

Biclustering Analysis and Results Exploration.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

18 6 exported

Complexity

6.1 avg / 17 max

Call network

18 nodes / 19 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,411

Files

30

Compiled share

36.3%

Has compiled src

Yes

Language breakdown

R 364 (25.8%)C/C++/src 512 (36.3%)Docs 357 (25.3%)Vignettes 178 (12.6%)

API

Exported functions

6

Internal functions

2

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

20%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

1.8.0

System requirements

C++ standard

License

GPL-2

License flags

SPDX valid, OSI approved

History

Versions

36

First release

2008-10-21

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

2

LOC over versions

v2.3: 1,225 LOCv2.4: 1,225 LOCv2.5: 1,233 LOCv2.6: 1,233 LOCv2.7: 1,233 LOCv2.8: 1,233 LOCv2.9: 1,233 LOCv2.10: 1,233 LOCv2.11: 1,233 LOCv2.12: 1,233 LOCv2.13: 1,233 LOCv2.14: 1,411 LOCv3.0: 1,411 LOCv3.1: 1,411 LOCv3.2: 1,411 LOCv3.3: 1,411 LOCv3.4: 1,411 LOCv3.5: 1,411 LOCv3.6: 1,411 LOCv3.7: 1,411 LOCv3.8: 1,411 LOCv3.9: 1,411 LOCv3.10: 1,411 LOCv3.11: 1,411 LOCv3.12: 1,411 LOCv3.13: 1,411 LOCv3.14: 1,411 LOCv3.15: 1,411 LOCv3.16: 1,411 LOCv3.17: 1,411 LOCv3.18: 1,411 LOCv3.19: 1,411 LOCv3.20: 1,411 LOCv3.21: 1,411 LOCv3.22: 1,411 LOCv3.23: 1,411 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
67%
References docs
22%

Topics

Depended on by (1)

Bioconductor (1)

People

Pierre Gestraud

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BicARE")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BicARE version 1.70.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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