Packages
21 packages on Bioconductor tagged Spatial or MicroarrayData or GeneSetEnrichment, most distinct IPs first
Spatial, MicroarrayData and GeneSetEnrichment in Topics
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| limma Linear Models for Microarray and Omics DataGordon Smyth | Gordon Smyth | software | 10 Aug 2026 | 45,965 | 6 |
| edgeR Empirical Analysis of Digital Gene Expression Data in RYunshun Chen | Yunshun Chen | software | 19 Oct 2026 | 32,392 | 10 |
| GSEABase Gene set enrichment data structures and methodsBioconductor Package Maintainer | Bioconductor Package Maintainer | software | 28 Apr 2026 | 13,344 | 46 |
| topGO Enrichment Analysis for Gene OntologyFederico Marini | Federico Marini | software | 28 Apr 2026 | 3,228 | 48 |
| GOstats Tools for manipulating GO and microarraysBioconductor Package Maintainer | Bioconductor Package Maintainer | software | 28 Apr 2026 | 2,437 | 63 |
| Category Category AnalysisBioconductor Package Maintainer | Bioconductor Package Maintainer | software | 28 Apr 2026 | 2,355 | 57 |
| safe Significance Analysis of Function and ExpressionLudwig Geistlinger | Ludwig Geistlinger | software | 3 May 2026 | 1,595 | 43 |
| goProfiles goProfiles: an R package for the statistical analysis of functional profilesAlex Sanchez | Alex Sanchez | software | 28 Apr 2026 | 1,065 | 47 |
| FlowSorted.Blood.450k Illumina HumanMethylation data on sorted blood cell populationsAndrew E Jaffe | Andrew E Jaffe | experiment | 5 May 2026 | 558 | 144 |
| SAGx Statistical Analysis of the GeneChip | no date on record | 447 | |||
| davidTiling Data and analysis scripts for David, Huber et al. yeast tiling array paperWolfgang Huber | Wolfgang Huber | experiment | 5 May 2026 | 384 | 76 |
| Hiiragi2013 Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineagesWolfgang Huber | Wolfgang Huber | experiment | 23 Jun 2026 | 338 | 67 |
| pd.atdschip.tiling Platform Design Info for Affymetrix Atdschip_tilingKristof De Beuf | Kristof De Beuf | experiment | 5 May 2026 | 319 | 53 |
| ConnectivityMap Functional connections between drugs, genes and diseases as revealed by common gene-expression changesPaul Shannon | Paul Shannon | experiment | 5 May 2026 | 281 | 0 |
| mammaPrintData RGLists from the Glas and Buyse breast cancer studiesLuigi Marchionni | Luigi Marchionni | experiment | 5 May 2026 | 269 | 0 |
| curatedBreastData Curated breast cancer gene expression data with survival and treatment informationLevi Waldron | Levi Waldron | experiment | 23 Jul 2026 | 268 | 77 |
| FlowSorted.DLPFC.450k Illumina HumanMethylation data on sorted frontal cortex cell populationsAndrew E Jaffe | Andrew E Jaffe | experiment | 5 May 2026 | 258 | 144 |
| FlowSorted.CordBloodNorway.450k Illumina HumanMethylation data on sorted cord blood cell populationskristina gervin | kristina gervin | experiment | 5 May 2026 | 243 | 144 |
| domainsignatures Geneset enrichment based on InterPro domain signatures | no date on record | 238 | |||
| ccdata Data for Combination Connectivity Mapping (ccmap) PackageAlex Pickering | Alex Pickering | experiment | 5 May 2026 | 233 | 0 |
| FlowSorted.CordBlood.450k Illumina 450k data on sorted cord blood cellsShan V. Andrews | Shan V. Andrews | experiment | 5 May 2026 | 221 | 144 |