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Topic: VariantAnnotation or Bayesian or MicroarrayData

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21 packages on Bioconductor tagged VariantAnnotation or Bayesian or MicroarrayData, most distinct IPs first

VariantAnnotation, Bayesian and MicroarrayData in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
pcaMethods
A collection of PCA methodsHenning Redestig		Henning Redestigsoftware28 Apr 20267,21410
PureCN
Copy number calling and SNV classification using targeted short read sequencingMarkus Riester		Markus Riestersoftware28 Apr 20261,083101
puma
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0)Xuejun Liu		Xuejun Liusoftware28 Apr 20261,03355
podkat
Position-Dependent Kernel Association TestUlrich Bodenhofer		Ulrich Bodenhofersoftware28 Apr 202694659
proDA
Differential Abundance Analysis of Label-Free Mass Spectrometry DataConstantin Ahlmann-Eltze		Constantin Ahlmann-Eltzesoftware28 Apr 202686428
phenopath
Genomic trajectories with heterogeneous genetic and environmental backgroundsKieran Campbell		Kieran Campbellsoftware28 Apr 202678554
PCAN
Phenotype Consensus ANalysis (PCAN)Matthew Page		Matthew Pagesoftware28 Apr 202672914
PROPS
PRObabilistic Pathway Score (PROPS)Lichy Han		Lichy Hansoftware28 Apr 202665976
ProteoDisco
Generation of customized protein variant databases from genomic variants, splice-junctions and manual sequencesJob van Riet		Job van Rietsoftware28 Apr 202665899
protGear
Protein Micro Array Data Management and Interactive VisualizationKennedy Mwai		Kennedy Mwaisoftware28 Apr 2026603196
plasmut
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somaticAdith Arun		Adith Arunsoftware28 Apr 202637820
pumadata
Various data sets for use with the puma packageXuejun liu		Xuejun liuexperiment5 May 202633556
parati
Parental Allele Transmission Inference for Trio Genotype DataJinyi Che		Jinyi Chesoftware28 Apr 2026313108
PREDAsampledata
expression and copy number data on clear cell renal carcinoma samplesFrancesco Ferrari		Francesco Ferrariexperiment5 May 202628259
pepDat
Peptide microarray data packageRenan Sauteraud		Renan Sauteraudexperiment5 May 202627611
pd.atdschip.tiling
Platform Design Info for Affymetrix Atdschip_tilingKristof De Beuf		Kristof De Beufexperiment5 May 202627353
prostateCancerVarambally
Prostate Cancer DataMark Dunning		Mark Dunningexperiment5 May 20262137
prostateCancerTaylor
Prostate Cancer DataMark Dunning		Mark Dunningexperiment5 May 20261787
prostateCancerCamcap
Prostate Cancer DataMark Dunning		Mark Dunningexperiment5 May 20261747
prostateCancerGrasso
Prostate Cancer DataMark Dunning		Mark Dunningexperiment5 May 20261727
prostateCancerStockholm
Prostate Cancer DataMark Dunning		Mark Dunningexperiment5 May 20261657