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36 packages on Bioconductor, most distinct IPs first

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
limma
Linear Models for Microarray and Omics DataGordon Smyth		Gordon Smythsoftware10 Aug 202645,9656
lumi
BeadArray Specific Methods for Illumina Methylation and Expression MicroarraysLei Huang		Lei Huangsoftware28 Apr 20262,454165
lpsymphony
Symphony integer linear programming solver in RVladislav Kim		Vladislav Kimsoftware28 Apr 20262,0100
LEA
LEA: an R package for Landscape and Ecological Association StudiesOlivier Francois		Olivier Francoissoftware28 Apr 20261,4074
lefser
R implementation of the LEfSE method for microbiome biomarker discoverySehyun Oh		Sehyun Ohsoftware28 Apr 20261,302176
limmaGUI
GUI for limma Package With Two Color MicroarraysGordon Smyth		Gordon Smythsoftware28 Apr 20261,16511
LoomExperiment
LoomExperiment containerBioconductor Package Maintainer		Bioconductor Package Maintainersoftware28 Apr 20261,11043
Linnorm
Linear model and normality based normalization and transformation method (Linnorm)Shun Hang Yip		Shun Hang Yipsoftware28 Apr 20261,08862
LOLA
Locus overlap analysis for enrichment of genomic rangesNathan Sheffield		Nathan Sheffieldsoftware28 Apr 20261,03924
LBE
Estimation of the false discovery rateCyril Dalmasso		Cyril Dalmassosoftware28 Apr 20269443
les
Identifying Differential Effects in Tiling Microarray DataJulian Gehring		Julian Gehringsoftware28 Apr 202688113
logicFS
Identification of SNP InteractionsHolger Schwender		Holger Schwendersoftware28 Apr 202687812
LPE
Methods for analyzing microarray data using Local Pooled Error (LPE) methodNitin Jain		Nitin Jainsoftware28 Apr 20268551
LymphoSeq
Analyze high-throughput sequencing of T and B cell receptorsDavid Coffey		David Coffeysoftware28 Apr 2026854111
LACE
Longitudinal Analysis of Cancer Evolution (LACE)Davide Maspero		Davide Masperosoftware28 Apr 2026840157
lipidr
Data Mining and Analysis of Lipidomics DatasetsAhmed Mohamed		Ahmed Mohamedsoftware28 Apr 2026839120
lionessR
Modeling networks for individual samples using LIONESSPing-Han Hsieh		Ping-Han Hsiehsoftware28 Apr 202683125
lmdme
Linear Model decomposition for Designed Multivariate ExperimentsCristobal Fresno		Cristobal Fresnosoftware28 Apr 20268279
LiquidAssociation
LiquidAssociationYen-Yi Ho		Yen-Yi Hosoftware28 Apr 202681359
lisaClust
lisaClust: Clustering of Local Indicators of Spatial AssociationEllis Patrick		Ellis Patricksoftware28 Apr 2026779242
ldblock
data structures for linkage disequilibrium measures in populationsVJ Carey		VJ Careysoftware28 Apr 202676624
LOBSTAHS
Lipid and Oxylipin Biomarker Screening through Adduct Hierarchy SequencesHenry Holm		Henry Holmsoftware28 Apr 2026741158
loci2path
Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLsTianlei Xu		Tianlei Xusoftware28 Apr 202673638
lfa
Logistic Factor Analysis for Categorical DataAlejandro Ochoa		Alejandro Ochoasoftware28 Apr 202672441
LinkHD
LinkHD: a versatile framework to explore and integrate heterogeneous data"Laura M Zingaretti"		"Laura M Zingaretti"software28 Apr 2026706132
LRBaseDbi
DBI to construct LRBase-related packageKoki Tsuyuzaki		Koki Tsuyuzakisoftware28 Apr 202669842
lpNet
Linear Programming Model for Network InferenceLars Kaderali		Lars Kaderalisoftware28 Apr 202668916
lungExpression
ExpressionSets for Parmigiani et al., 2004 Clinical Cancer Research paperRobert Scharpf		Robert Scharpfexperiment5 May 20266827
LRcell
Differential cell type change analysis using Logistic/linear RegressionWenjing Ma		Wenjing Masoftware28 Apr 202667885
lemur
Latent Embedding Multivariate RegressionConstantin Ahlmann-Eltze		Constantin Ahlmann-Eltzesoftware30 Jul 202667151