ldblock
Bioc currentdata structures for linkage disequilibrium measures in populations
Release Lineage
Entered 3.1 · Apr 17, 2015
Current · Requires R 4.6
Description
Define data structures for linkage disequilibrium measures in populations.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
9 7 exported
Complexity
3.7 avg / 6 max
Call network
9 nodes / 2 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
844
Files
29
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
7
Internal functions
2
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
4
Dep constraint coverage
16.7%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
23
First release
2015-04-16
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
25
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 12includes a package overview page
- Examples that run
- 78%7 run in a plain check (3 of them under a condition) · 1 never run · 1 hold no code
- Exported functions with examples
- 100%
- Documented parameters
- 89%
- Return-value docs
- 100%
- Help pages citing references
- 0%
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
No development-tooling practices detected in the Bioconductor git repository.
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| EUR_singletons | vector | 300 elements | No other package |
| sampinf_1kg | data.frame | 3,500 × 16 | No other package |
Suggested by (1)
People (from the free-text Author field)
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