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Topic: RNASeq or Homo_sapiens or GeneExpression

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50 packages on Bioconductor tagged RNASeq or Homo_sapiens or GeneExpression, most distinct IPs first

RNASeq, Homo_sapiens and GeneExpression in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
IlluminaHumanMethylation450kanno.ilmn12.hg19
Annotation for Illumina's 450k methylation arraysKasper Daniel Hansen		Kasper Daniel Hansenannotationno date on record2,852144
IHW
Independent Hypothesis WeightingNikos Ignatiadis		Nikos Ignatiadissoftware28 Apr 20261,93110
IlluminaHumanMethylation450kmanifest
Annotation for Illumina's 450k methylation arraysKasper Daniel Hansen		Kasper Daniel Hansenannotationno date on record1,773144
IlluminaHumanMethylationEPICanno.ilm10b4.hg19
Annotation for Illumina's EPIC methylation arraysKasper Daniel Hansen		Kasper Daniel Hansenannotationno date on record1,677144
IlluminaHumanMethylationEPICmanifest
Manifest for Illumina's EPIC methylation arraysKasper Daniel Hansen		Kasper Daniel Hansenannotationno date on record1,449144
IsoformSwitchAnalyzeR
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq dataKristoffer Vitting-Seerup		Kristoffer Vitting-Seerupsoftware28 Apr 20261,421151
illuminaHumanv4.db
Illumina HumanHT12v4 annotation data (chip illuminaHumanv4)Mark Dunning		Mark Dunningannotationno date on record1,27443
iSEE
Interactive SummarizedExperiment ExplorerKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 20261,237109
INSPEcT
Modeling RNA synthesis, processing and degradation with RNA-seq dataStefano de Pretis		Stefano de Pretissoftware28 Apr 20261,213123
ideal
Interactive Differential Expression AnaLysisFederico Marini		Federico Marinisoftware28 Apr 20261,134235
IlluminaHumanMethylationEPICv2anno.20a1.hg38
Annotation for Illumina's EPIC v2.0 methylation arraysZuguang Gu		Zuguang Guannotationno date on record1,096144
IlluminaHumanMethylationEPICv2manifest
Manifest for Illumina's EPIC v2.0 methylation arraysZuguang Gu		Zuguang Guannotationno date on record1,031144
isomiRs
Analyze isomiRs and miRNAs from small RNA-seqLorena Pantano		Lorena Pantanosoftware28 Apr 20261,029143
IntEREst
Intron-Exon Retention EstimatorAli Oghabian		Ali Oghabiansoftware28 Apr 2026950137
IVAS
Identification of genetic Variants affecting Alternative SplicingSeonggyun Han		Seonggyun Hansoftware28 Apr 2026898112
icetea
Integrating Cap Enrichment with Transcript Expression AnalysisVivek Bhardwaj		Vivek Bhardwajsoftware28 Apr 2026838106
iSEEu
iSEE UniverseKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 2026829112
InTAD
Search for correlation between epigenetic signals and gene expression in TADsKonstantin Okonechnikov		Konstantin Okonechnikovsoftware28 Apr 2026814134
iCheck
QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression DataWeiliang Qiu		Weiliang Qiusoftware28 Apr 2026801190
iGC
An integrated analysis package of Gene expression and Copy number alterationLiang-Bo Wang		Liang-Bo Wangsoftware28 Apr 20267905
illuminaHumanv3.db
Illumina HumanHT12v3 annotation data (chip illuminaHumanv3)Mark Dunning		Mark Dunningannotationno date on record75343
ILoReg
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq dataJohannes Smolander		Johannes Smolandersoftware28 Apr 2026749126
iasva
Iteratively Adjusted Surrogate Variable AnalysisDonghyung Lee		Donghyung Leesoftware28 Apr 202672337
IntramiRExploreR
Predicting Targets for Drosophila Intragenic miRNAsSurajit Bhattacharya		Surajit Bhattacharyasoftware28 Apr 202670637
ivygapSE
A SummarizedExperiment for Ivy-GAP dataVJ Carey		VJ Careysoftware28 Apr 2026669152
iNETgrate
Integrates DNA methylation data with gene expression in a single gene networkHabil Zare		Habil Zaresoftware28 Apr 2026646293
ISLET
Individual-Specific ceLl typE referencing ToolHao Feng		Hao Fengsoftware28 Apr 202663755
iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific eventsYingying Wei		Yingying Weisoftware28 Apr 20266002
iSEEpathways
iSEE extension for panels related to pathway analysisKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 2026593110
ISoLDE
Integrative Statistics of alleLe Dependent ExpressionChristelle Reynès		Christelle Reynèssoftware28 Apr 20265894