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Topic: DimensionReduction or MicroarrayData or ImmunoOncology

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33 packages on Bioconductor tagged DimensionReduction or MicroarrayData or ImmunoOncology, most distinct IPs first

DimensionReduction, MicroarrayData and ImmunoOncology in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
IHW
Independent Hypothesis WeightingNikos Ignatiadis		Nikos Ignatiadissoftware28 Apr 20261,93110
IsoformSwitchAnalyzeR
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq dataKristoffer Vitting-Seerup		Kristoffer Vitting-Seerupsoftware28 Apr 20261,421151
iSEE
Interactive SummarizedExperiment ExplorerKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 20261,237109
isobar
Analysis and quantitation of isobarically tagged MSMS proteomics dataFlorian P Breitwieser		Florian P Breitwiesersoftware28 Apr 20261,14378
ideal
Interactive Differential Expression AnaLysisFederico Marini		Federico Marinisoftware28 Apr 20261,134235
imcRtools
Methods for imaging mass cytometry data analysisDaniel Schulz		Daniel Schulzsoftware19 May 20261,064181
isomiRs
Analyze isomiRs and miRNAs from small RNA-seqLorena Pantano		Lorena Pantanosoftware28 Apr 20261,029143
IntEREst
Intron-Exon Retention EstimatorAli Oghabian		Ali Oghabiansoftware28 Apr 2026950137
immApex
Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep LearningNick Borcherding		Nick Borcherdingsoftware28 Apr 202693354
immunoClust
immunoClust - Automated Pipeline for Population Detection in Flow CytometryTill Soerensen		Till Soerensensoftware28 Apr 202691824
IVAS
Identification of genetic Variants affecting Alternative SplicingSeonggyun Han		Seonggyun Hansoftware28 Apr 2026898112
igblastr
User-friendly R Wrapper to IgBLASTHervé Pagès		Hervé Pagèssoftware21 Oct 202687042
icetea
Integrating Cap Enrichment with Transcript Expression AnalysisVivek Bhardwaj		Vivek Bhardwajsoftware28 Apr 2026838106
iSEEu
iSEE UniverseKevin Rue-Albrecht		Kevin Rue-Albrechtsoftware28 Apr 2026829112
InTAD
Search for correlation between epigenetic signals and gene expression in TADsKonstantin Okonechnikov		Konstantin Okonechnikovsoftware28 Apr 2026814134
IPO
Automated Optimization of XCMS Data Processing parametersThomas Lieb		Thomas Liebsoftware28 Apr 2026793160
ILoReg
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq dataJohannes Smolander		Johannes Smolandersoftware28 Apr 2026749126
iasva
Iteratively Adjusted Surrogate Variable AnalysisDonghyung Lee		Donghyung Leesoftware28 Apr 202672337
IgGeneUsage
Differential gene usage in immune repertoiresSimo Kitanovski		Simo Kitanovskisoftware28 Apr 202669979
Illumina450ProbeVariants.db
Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probesTiffany Morris		Tiffany Morrisexperiment5 May 20266900
iCNV
Integrated Copy Number Variation detectionZilu Zhou		Zilu Zhousoftware28 Apr 202667895
IsoCorrectoR
Correction for natural isotope abundance and tracer purity in MS and MS/MS data from stable isotope labeling experimentsChristian Kohler		Christian Kohlersoftware28 Apr 202667440
iNETgrate
Integrates DNA methylation data with gene expression in a single gene networkHabil Zare		Habil Zaresoftware28 Apr 2026646293
iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific eventsYingying Wei		Yingying Weisoftware28 Apr 20266002
ISoLDE
Integrative Statistics of alleLe Dependent ExpressionChristelle Reynès		Christelle Reynèssoftware28 Apr 20265894
IMAS
Integrative analysis of Multi-omics data for Alternative SplicingSeonggyun Han		Seonggyun Hansoftware3 Feb 2026583
immunotation
Tools for working with diverse immune genesKatharina Imkeller		Katharina Imkellersoftware28 Apr 202657858
IsoCorrectoRGUI
Graphical User Interface for IsoCorrectoRChristian Kohler		Christian Kohlersoftware28 Apr 202657743
INDEED
Interactive Visualization of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection PackageRessom group		Ressom groupsoftware28 Apr 2026526107
iSEEfier
Streamlining the creation of initial states for starting an iSEE instanceNajla Abassi		Najla Abassisoftware28 Apr 2026503115