Packages
227 packages on Bioconductor, most distinct IPs first
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| HDF5Array HDF5 datasets as array-like objects in RHervé Pagès | Hervé Pagès | software | 28 Apr 2026 | 20,537 | 28 |
| HDO.db A set of annotation maps describing the entire Human Disease OntologyErqiang Hu | Erqiang Hu | annotation | no date on record | 5,277 | 42 |
| hgu133plus2.db Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 4,227 | 43 |
| HSMMSingleCell Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM)Cole Trapnell | Cole Trapnell | experiment | 5 May 2026 | 3,553 | 0 |
| hgu133a.db Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,996 | 43 |
| hgu133plus2cdf hgu133plus2cdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,618 | 42 |
| hgu95av2.db Affymetrix Affymetrix HG_U95Av2 Array annotation data (chip hgu95av2)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,605 | 43 |
| hpar Human Protein Atlas in RLaurent Gatto | Laurent Gatto | software | 28 Apr 2026 | 1,382 | 64 |
| hopach Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)Katherine S. Pollard | Katherine S. Pollard | software | 28 Apr 2026 | 1,337 | 9 |
| hugene10sttranscriptcluster.db Affymetrix hugene10 annotation data (chip hugene10sttranscriptcluster)Biocore Package Maintainer | Biocore Package Maintainer | annotation | no date on record | 1,302 | 43 |
| h5vc Managing alignment tallies using a hdf5 backendPaul Theodor Pyl | Paul Theodor Pyl | software | 28 Apr 2026 | 1,295 | 86 |
| heatmaps Flexible Heatmaps for Functional Genomics and Sequence FeaturesMalcolm Perry | Malcolm Perry | software | 28 Apr 2026 | 1,246 | 57 |
| hgu95av2cdf hgu95av2cdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,217 | 42 |
| HiTC High Throughput Chromosome Conformation Capture analysisNicolas Servant | Nicolas Servant | software | 28 Apr 2026 | 1,213 | 58 |
| hgu95av2probe Probe sequence data for microarrays of type hgu95av2Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,164 | 42 |
| HiCcompare HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasetsMikhail Dozmorov | Mikhail Dozmorov | software | 28 Apr 2026 | 1,151 | 74 |
| Heatplus Heatmaps with row and/or column covariates and colored clustersAlexander Ploner | Alexander Ploner | software | 28 Apr 2026 | 1,146 | 4 |
| HTSFilter Filter replicated high-throughput transcriptome sequencing dataAndrea Rau | Andrea Rau | software | 28 Apr 2026 | 1,128 | 58 |
| HTqPCR Automated analysis of high-throughput qPCR dataMatthew N. McCall | Matthew N. McCall | software | 28 Apr 2026 | 1,122 | 21 |
| HubPub Utilities to create and use Bioconductor HubsKayla Interdonato | Kayla Interdonato | software | 21 Jul 2026 | 1,103 | 77 |
| HMMcopy Copy number prediction with correction for GC and mappability bias for HTS dataDaniel Lai | Daniel Lai | software | 28 Apr 2026 | 1,099 | 2 |
| hipathia HiPathia: High-throughput Pathway AnalysisMarta R. Hidalgo | Marta R. Hidalgo | software | 28 Apr 2026 | 1,081 | 154 |
| HiCBricks Framework for Storing and Accessing Hi-C Data Through HDF FilesKoustav Pal | Koustav Pal | software | 16 Jul 2026 | 1,027 | 76 |
| Homo.sapiens Annotation package for the Homo.sapiens objectBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,006 | 82 |
| HilbertCurve Making 2D Hilbert CurveZuguang Gu | Zuguang Gu | software | 28 Apr 2026 | 1,004 | 20 |
| HilbertVis Hilbert curve visualizationSimon Anders | Simon Anders | software | 28 Apr 2026 | 1,004 | 6 |
| Harman The removal of batch effects from datasets using a PCA and constrained optimisation based techniqueJason Ross | Jason Ross | software | 28 Apr 2026 | 975 | 11 |
| hgu133acdf hgu133acdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 971 | 42 |
| hgu133aprobe Probe sequence data for microarrays of type hgu133aBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 939 | 42 |
| hypergraph A package providing hypergraph data structuresBioconductor Package Maintainer | Bioconductor Package Maintainer | software | 28 Apr 2026 | 933 | 8 |