Skip to content

Heatplus

Bioc current

Heatmaps with row and/or column covariates and colored clusters

v3.20.0 · software · GPL (>= 2)

Release Lineage

Entered 1.8 · Apr 27, 2006

Current · Requires R 4.6

1.0 In 41 of 49 releases 3.23

Description

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

28 25 exported

Complexity

8.3 avg / 37 max

Call network

28 nodes / 20 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

5,484

Files

30

Compiled share

0%

Has compiled src

No

Language breakdown

R 2,499 (45.6%)Docs 1,513 (27.6%)Vignettes 1,472 (26.8%)

API

Exported functions

25

Internal functions

3

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

41

First release

2006-04-25

Latest release

2026-04-28

Avg cadence

183 days

Cold removal rate

100%

Dep drift

4

LOC over versions

v1.8: 862 LOCv1.9: 876 LOCv2.0: 876 LOCv2.1: 876 LOCv2.2: 876 LOCv2.3: 876 LOCv2.4: 878 LOCv2.5: 878 LOCv2.6: 878 LOCv2.7: 878 LOCv2.8: 878 LOCv2.9: 2,337 LOCv2.10: 2,337 LOCv2.11: 2,350 LOCv2.12: 2,350 LOCv2.13: 2,356 LOCv2.14: 3,780 LOCv3.0: 3,802 LOCv3.1: 3,802 LOCv3.2: 3,895 LOCv3.3: 3,895 LOCv3.4: 3,895 LOCv3.5: 3,895 LOCv3.6: 3,914 LOCv3.7: 3,914 LOCv3.8: 3,914 LOCv3.9: 3,914 LOCv3.10: 3,914 LOCv3.11: 3,914 LOCv3.12: 3,914 LOCv3.13: 5,484 LOCv3.14: 5,484 LOCv3.15: 5,484 LOCv3.16: 5,484 LOCv3.17: 5,484 LOCv3.18: 5,484 LOCv3.19: 5,484 LOCv3.20: 5,484 LOCv3.21: 5,484 LOCv3.22: 5,484 LOCv3.23: 5,484 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo
Examples that run
95%
Documented parameters
86%
Return-value docs
90%
References docs
0%

Topics

Depended on by (6)

CRAN (1)

People

Alexander Ploner

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("Heatplus")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for Heatplus version 3.20.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →

Privacy choices

These apply to this browser and are stored on this device only. Nothing about your choice is sent to us.

Read the privacy policy