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252 packages on Bioconductor, most distinct IPs first

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
HDF5Array
HDF5 datasets as array-like objects in RHervé Pagès		Hervé Pagèssoftware28 Apr 202620,53728
h5mread
A fast HDF5 readerHervé Pagès		Hervé Pagèssoftware23 Aug 202615,16726
HDO.db
A set of annotation maps describing the entire Human Disease OntologyErqiang Hu		Erqiang Huannotationno date on record5,27742
hgu133plus2.db
Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record4,22743
HSMMSingleCell
Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM)Cole Trapnell		Cole Trapnellexperiment5 May 20263,5530
hgu133a.db
Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,99643
hgu133plus2cdf
hgu133plus2cdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,61842
hgu95av2.db
Affymetrix Affymetrix HG_U95Av2 Array annotation data (chip hgu95av2)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,60543
hpar
Human Protein Atlas in RLaurent Gatto		Laurent Gattosoftware28 Apr 20261,38264
hopach
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)Katherine S. Pollard		Katherine S. Pollardsoftware28 Apr 20261,3379
hugene10sttranscriptcluster.db
Affymetrix hugene10 annotation data (chip hugene10sttranscriptcluster)Biocore Package Maintainer		Biocore Package Maintainerannotationno date on record1,30243
h5vc
Managing alignment tallies using a hdf5 backendPaul Theodor Pyl		Paul Theodor Pylsoftware28 Apr 20261,29586
heatmaps
Flexible Heatmaps for Functional Genomics and Sequence FeaturesMalcolm Perry		Malcolm Perrysoftware28 Apr 20261,24657
hgu95av2cdf
hgu95av2cdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,21742
HiTC
High Throughput Chromosome Conformation Capture analysisNicolas Servant		Nicolas Servantsoftware28 Apr 20261,21358
hgu95av2probe
Probe sequence data for microarrays of type hgu95av2Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,16442
HiCcompare
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasetsMikhail Dozmorov		Mikhail Dozmorovsoftware28 Apr 20261,15174
Heatplus
Heatmaps with row and/or column covariates and colored clustersAlexander Ploner		Alexander Plonersoftware28 Apr 20261,1464
HTSFilter
Filter replicated high-throughput transcriptome sequencing dataAndrea Rau		Andrea Rausoftware28 Apr 20261,12858
HTqPCR
Automated analysis of high-throughput qPCR dataMatthew N. McCall		Matthew N. McCallsoftware28 Apr 20261,12221
HubPub
Utilities to create and use Bioconductor HubsKayla Interdonato		Kayla Interdonatosoftware21 Jul 20261,10377
HMMcopy
Copy number prediction with correction for GC and mappability bias for HTS dataDaniel Lai		Daniel Laisoftware28 Apr 20261,0992
hipathia
HiPathia: High-throughput Pathway AnalysisMarta R. Hidalgo		Marta R. Hidalgosoftware28 Apr 20261,081154
HiCBricks
Framework for Storing and Accessing Hi-C Data Through HDF FilesKoustav Pal		Koustav Palsoftware16 Jul 20261,02776
Homo.sapiens
Annotation package for the Homo.sapiens objectBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record1,00682
HilbertCurve
Making 2D Hilbert CurveZuguang Gu		Zuguang Gusoftware28 Apr 20261,00420
HilbertVis
Hilbert curve visualizationSimon Anders		Simon Anderssoftware28 Apr 20261,0046
Harman
The removal of batch effects from datasets using a PCA and constrained optimisation based techniqueJason Ross		Jason Rosssoftware28 Apr 202697511
hgu133acdf
hgu133acdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record97142
hgu133aprobe
Probe sequence data for microarrays of type hgu133aBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record93942