R Observatory
Menu
Search

Packages

Downloads

Distinct IPs a month

Licence

Licence family offered

Topic: ExpressionData or Epigenetics or DifferentialExpression

biocViews term

Category

People
AI tools

AI coding tool

AI tool found as

Model named in commits

Code

Source repository on GitHub known

Dates
First letter: B

First letter

Release

In the current release or not

Bioconductor release

Clear all

24 packages on Bioconductor tagged ExpressionData or Epigenetics or DifferentialExpression, most distinct IPs first

ExpressionData, Epigenetics and DifferentialExpression in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
bumphunter
Bump HunterTamilselvi Guharaj		Tamilselvi Guharajsoftware28 Apr 20264,26883
ballgown
Flexible, isoform-level differential expression analysisJack Fu		Jack Fusoftware4 Nov 20251,84487
baySeq
Empirical Bayesian analysis of patterns of differential expression in count dataSamuel Granjeaud		Samuel Granjeaudsoftware28 Apr 20261,36420
BioNet
Routines for the functional analysis of biological networksMarcus Dittrich		Marcus Dittrichsoftware28 Apr 20261,26250
BASiCS
Bayesian Analysis of Single-Cell Sequencing dataCatalina Vallejos		Catalina Vallejossoftware29 Apr 20261,206129
BEAT
BEAT - BS-Seq Epimutation Analysis ToolkitKemal Akman		Kemal Akmansoftware28 Apr 20261,06970
bambu
Context-Aware Transcript Quantification from Long Read RNA-Seq dataYing Chen		Ying Chensoftware28 Apr 20261,06793
biobroom
Turn Bioconductor objects into tidy data framesJohn D. Storey		John D. Storeysoftware30 Oct 202589030
BLMA
BLMA: A package for bi-level meta-analysisVan-Dung Pham		Van-Dung Phamsoftware7 Sep 202688474
blima
Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) levelVojtěch Kulvait		Vojtěch Kulvaitsoftware28 Apr 202686866
benchdamic
Benchmark of differential abundance methods on microbiome dataMatteo Calgaro		Matteo Calgarosoftware28 Apr 2026866378
blacksheepr
Outlier Analysis for pairwise differential comparisonRugglesLab		RugglesLabsoftware28 Apr 2026827124
BatchQC
Batch Effects Quality Control SoftwareYaoan Leng		Yaoan Lengsoftware15 Sep 2026818245
biotmle
Targeted Learning with Moderated Statistics for Biomarker DiscoveryNima Hejazi		Nima Hejazisoftware28 Jul 202679493
BANDITS
BANDITS: Bayesian ANalysis of DIfferenTial SplicingSimone Tiberi		Simone Tiberisoftware25 Oct 202677846
BADER
Bayesian Analysis of Differential Expression in RNA Sequencing DataAndreas Neudecker		Andreas Neudeckersoftware28 Apr 20266820
BiFET
Bias-free Footprint Enrichment TestAhrim Youn		Ahrim Younsoftware28 Apr 202665412
BPRMeth
Model higher-order methylation profilesChantriolnt-Andreas Kapourani		Chantriolnt-Andreas Kapouranisoftwareno date on record606
BASiCStan
Stan implementation of BASiCSAlan O'Callaghan		Alan O'Callaghansoftware2 Jul 2026575155
broadSeq
broadSeq : for streamlined exploration of RNA-seq dataRishi Das Roy		Rishi Das Roysoftware28 Apr 2026553238
betterChromVAR
Improved ChromVAR (Chromatin Variation Across Regions)Pierre-Luc Germain		Pierre-Luc Germainsoftware7 May 202633237
bodymapRat
Experimental dataset from the rat BodyMap projectStephanie Hicks		Stephanie Hicksexperiment5 May 202626275
biotmleData
Example experimental microarray data set for the "biotmle" R packageNima Hejazi		Nima Hejaziexperiment5 May 20262480
BioPlex
R-side access to BioPlex protein-protein interaction dataLudwig Geistlinger		Ludwig Geistlingerexperiment5 May 202621584