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BLMA

Bioc current

BLMA: A package for bi-level meta-analysis

v1.36.0 · software · GPL (>=2)

Release Lineage

Entered 3.5 · Apr 25, 2017

Current · Requires R 4.6

1.0 In 19 of 49 releases 3.23

Description

Suit of tools for bi-level meta-analysis. The package can be used in a wide range of applications, including general hypothesis testings, differential expression analysis, functional analysis, and pathway analysis.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

23 13 exported

Complexity

2.6 avg / 10 max

Call network

23 nodes / 8 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

4,337

Files

36

Compiled share

0%

Has compiled src

No

Language breakdown

R 1,422 (32.8%)Tests 1 (0%)Docs 996 (23%)Vignettes 1,918 (44.2%)

API

Exported functions

12

Internal functions

10

Recent export changes

v3.5+10 addCLT, bilevelAnalysisClassic, bilevelAnalysisGene +7 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>=2)

License flags

not SPDX, not OSI

History

Versions

19

First release

2017-04-24

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

2

LOC over versions

v3.5: 3,839 LOCv3.6: 3,839 LOCv3.7: 3,839 LOCv3.8: 3,839 LOCv3.9: 3,839 LOCv3.10: 3,839 LOCv3.11: 3,839 LOCv3.12: 4,337 LOCv3.13: 4,337 LOCv3.14: 4,337 LOCv3.15: 4,337 LOCv3.16: 4,337 LOCv3.17: 4,337 LOCv3.18: 4,337 LOCv3.19: 4,337 LOCv3.20: 4,337 LOCv3.21: 4,337 LOCv3.22: 4,337 LOCv3.23: 4,337 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
88%

Topics

People

Van-Dung Pham

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BLMA")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BLMA version 1.36.0 [Data set]. HJJB, LLC. Data release v2026-08-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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