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Topic: AffymetrixChip or Transcription or SingleCell

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27 packages on Bioconductor tagged AffymetrixChip or Transcription or SingleCell, most distinct IPs first

AffymetrixChip, Transcription and SingleCell in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
bluster
Clustering Algorithms for BioconductorAaron Lun		Aaron Lunsoftware28 Apr 202610,90344
batchelor
Single-Cell Batch Correction MethodsAaron Lun		Aaron Lunsoftware28 Apr 20265,72056
BayesSpace
Clustering and Resolution Enhancement of Spatial TranscriptomesSenbai Kang		Senbai Kangsoftware28 Apr 20261,304140
BASiCS
Bayesian Analysis of Single-Cell Sequencing dataCatalina Vallejos		Catalina Vallejossoftware29 Apr 20261,206129
Banksy
Spatial transcriptomic clusteringJoseph Lee		Joseph Leesoftware3 May 20261,166109
bambu
Context-Aware Transcript Quantification from Long Read RNA-Seq dataYing Chen		Ying Chensoftware28 Apr 20261,06793
BicARE
Biclustering Analysis and Results ExplorationPierre Gestraud		Pierre Gestraudsoftware28 Apr 202696455
BUSpaRse
kallisto | bustools R utilitiesLambda Moses		Lambda Mosessoftware28 Apr 2026916121
BioTIP
BioTIP: An R package for characterization of Biological Tipping-PointFelix Yu		Felix Yusoftware28 Apr 202688273
blacksheepr
Outlier Analysis for pairwise differential comparisonRugglesLab		RugglesLabsoftware28 Apr 2026827124
BUMHMM
Computational pipeline for computing probability of modification from structure probing experiment dataAlina Selega		Alina Selegasoftware28 Apr 2026791122
breakpointR
Find breakpoints in Strand-seq dataDavid Porubsky		David Porubskysoftware28 Apr 202678573
BANDITS
BANDITS: Bayesian ANalysis of DIfferenTial SplicingSimone Tiberi		Simone Tiberisoftware25 Oct 202677846
bayNorm
Single-cell RNA sequencing data normalizationWenhao Tang		Wenhao Tangsoftware28 Apr 202677350
BUSseq
Batch Effect Correction with Unknow Subtypes for scRNA-seq dataFangda Song		Fangda Songsoftware28 Apr 202670731
BiFET
Bias-free Footprint Enrichment TestAhrim Youn		Ahrim Younsoftware28 Apr 202665412
BPRMeth
Model higher-order methylation profilesChantriolnt-Andreas Kapourani		Chantriolnt-Andreas Kapouranisoftwareno date on record606
blase
Bulk Linking Analysis for Single-cell ExperimentsAndrew McCluskey		Andrew McCluskeysoftware11 Aug 2026579190
BASiCStan
Stan implementation of BASiCSAlan O'Callaghan		Alan O'Callaghansoftware2 Jul 2026575155
bovineprobe
Probe sequence data for microarrays of type bovineBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record33342
barley1probe
Probe sequence data for microarrays of type barley1Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record32742
bovine.db
Affymetrix Affymetrix Bovine Array annotation data (chip bovine)Bioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record31243
barley1cdf
barley1cdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record30242
bovinecdf
bovinecdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record30142
BatChef
Single-cell RNA-seq batch effects correction methods interfaceElena Zuin		Elena Zuinsoftware28 Jun 2026297311
bsubtilisprobe
Probe sequence data for microarrays of type bsubtilisBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record25742
bsubtiliscdf
bsubtiliscdfBioconductor Package Maintainer		Bioconductor Package Maintainerannotationno date on record25242