R Observatory: Metrics for voluModel version 0.2.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

voluModel

0.2.5Package record

Modeling Species Distributions in Three Dimensions

0packages depend

3.8Kdownloads / year

75.9%test coverage

13/13flavors OK

Overview

About

Maintained by Hannah L. OwensCRAN page ↗GitHub ↗Website ↗Issues ↗

Facilitates modeling species' ecological niches and geographic distributions based on occurrences and environments that have a vertical as well as horizontal component, and projecting models into three-dimensional geographic space. Working in three dimensions is useful in an aquatic context when the organisms one wishes to model can be found across a wide range of depths in the water column. The package also contains functions to automatically generate marine training model training regions using machine learning, and interpolate and smooth patchily sampled environmental rasters using thin plate splines. Davis Rabosky AR, Cox CL, Rabosky DL, Title PO, Holmes IA, Feldman A, McGuire JA (2016) doi:10.1038/ncomms11484. Nychka D, Furrer R, Paige J, Sain S (2021) doi:10.5065/D6W957CT. Pateiro-Lopez B, Rodriguez-Casal A (2022) https://CRAN.R-project.org/package=alphahull.

Changes in 0.2.5

Fixed ggtext bug in pointCompMap().

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("voluModel", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("hannahlowens/voluModel")

Development version from hannahlowens/voluModel. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-volumodel

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-voluModel

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-voluModel

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 16.9 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-30
ERROR12 OK, 1 ERROR2026-07-12
OK13 OK2026-06-08

Show 6 earlier changesHide 6 earlier changes

ERROR12 OK, 1 ERROR2026-06-07
OK8 OK2026-05-24
ERROR9 OK, 4 ERROR2026-05-06
OK14 OK2026-03-19
ERROR13 OK, 1 ERROR2026-03-12
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.5

README· In the repository, left out of the releaseVignettesYes · 5 · dynamicNEWSYes · 100% structured · mentions 0.2.5Citation fileYes · computed when R runs itWebsiteYes · pkgdown

Help pages: 29 (6 internal)
Examples that run: 89%25 run in a plain check · 3 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 97%
Documented parameters: 99%
Return-value docs: 100%
Help pages citing references: 7%

Vignettes (5)

How these are measured

Downloads

3.8K

CRAN downloads in the past year

Rank #10,357 · ~11/day · ~321/mo

Releases R versions

Daily download trend is not available in this view yet.

33830 days

1K90 days

3.8K1 year

Compare downloads with other packages →

Also on107 r2u6 autocran

How downloads are counted

Repository

hannahlowens/volumodel ↗Account: hannahlowens

12Stars

2Forks

2Open issues

0Open PRs

14Releases

498Commits

2Commit identities

License file reads as GPL-3.0 · 498 commits · Last activity 2026-07-23 · Default branch at 0.2.5.9000, ahead of CRAN 0.2.5 (checked 2026-10-25)

Responsiveness

How these are sampled

PRs merged (all time): 67%
Median days to close, 50 most recently updated closed issues: 29
Median days to close, 50 most recently updated closed PRs: 0

Releases over time

2026-07-14 · 132026-07-24 · 14

How these are measured

PracticesBeta

11 development-tooling and community-health practices detected across 7 families in the upstream repository

Checks run against github.com/hannahlowens/volumodel on 2026-10-25.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Governance and community (2)

Code of conductContributing guide

Docs source (3)

pkgdown

GitHub Pages site last deployed 2026-07-23 · The repository has a site deploy workflow

Coverage (1)

Coverage reporting (Codecov)

Show all practicesHide 3 practices

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

19 external dependencies (excludes base and recommended)

Installing voluModel adds 95 packages (61 with compiled code, 89 MB of source tarballs). Heaviest: stringi 11 MB, sf 9.3 MB, ggplot2 6.0 MB.

Depends (1)

R >= 4.0.0

Imports (13)

dplyr fields ggplot2 ggtextgrDevicesmethodsmetR predicts rangeBuilder rnaturalearth terra viridisLite sf

LinkingTo (0)

none

Suggests (10)

testthatnlmeknitr covr gridExtralatticerJava rmarkdown rnaturalearthdata tibble

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Hannah L. Owens

Carsten Rahbek

Author

Emmaline Sheahan

Author · added in 0.2.3

Releases (13)

Pick two releases to compare their code metrics.

0.2.5Latest
record
2026-07-23 · current release · diff ↗
unarchivedReturned to CRAN
2026-05-23
0.2.4
record
2026-05-23 · diff ↗ ·
added 6 exports
cleanDepth, depthMatch, env_stack_transform, maxent_3D, partition_3D, threshold_3D
R
R 4.6.0 released · 2026-04-24
0.2.3
record
2025-07-19 · diff ↗
archivedRemoved from CRAN
2025-05-19
issues were not corrected in time
R
R 4.5.0 released · 2025-04-11
0.2.2
record
2024-08-21 · diff ↗ ·
added 2 exports
transectPlot, verticalSample
R
R 4.4.0 released · 2024-04-24
0.2.1
record
2024-01-24 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.2.0
record
2023-04-11 · diff ↗ ·
added 1 export
centerPointRasterTemplate
0.1.9
record
2023-01-18 · diff ↗
0.1.8
record
2022-11-28 · diff ↗
0.1.7
record
2022-11-17 · diff ↗ ·
added 1 export
blendColor
0.1.6
record
2022-06-27 · diff ↗

Show 7 earlier eventsHide 7 earlier events

unarchivedReturned to CRAN
2022-06-05
0.1.5
record
2022-06-05 · diff ↗
archivedRemoved from CRAN
2022-05-21
check issues were not corrected in time
R
R 4.2.0 released · 2022-04-22
0.1.3
record
2022-03-21 · diff ↗
0.1.1
record
2022-03-15
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2022-03-15
Total releases: 13 / 4 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0.0
Download size: 2.8 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("voluModel")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for voluModel version 0.2.5 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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