R Observatory: Metrics for triageR version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

triageR

0.1.1

Automated Machine Learning and AI Agent Tools for Clinical Prediction Modelling

0packages depend

138downloads / year

76.0%test coverage

13/13checks pass

Overview

About

Maintained by Uwakmfon PaulFirst published 2026-07-292 releasesCRAN page ↗GitHub ↗

Provides a streamlined workflow for building, validating, and reporting clinical prediction models. Combines standard machine learning tools with an optional AI agent that recommends appropriate statistical methods, runs sensitivity analyses, and flags common pitfalls. Includes automated generation of reports aligned with TRIPOD+AI reporting guidance (Collins et al. (2024 doi:10.1136/bmj-2023-078378)) for reproducible, guideline-aligned research.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("triageR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("DevWebWacky/triageR")

Development version from DevWebWacky/triageR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-triager

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-triageR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-triageR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.8 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 0.35

76.0%

Coverage · measured lines

100%

Documentation · exports

14

Dependencies · direct

Check history

OK2026-08-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-07-30
0 OK · 0 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE

Documentation

READMEYes · 427 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 50%
Documented parameters: 99%
Return-value docs: 100%
References docs: 0%

Downloads

138

CRAN downloads in the past year

Rank #24,604 · ~0/day · ~12/mo

Releases R versions

Daily download trend is not available in this view yet.

13830 days

13890 days

1381 year

Compare downloads with other packages →

Also on3 r2u

Repository

GitHub ↗ devwebwacky/triager

0Stars

0Forks

1Open issues

0Open PRs

0Releases

Last activity 2026-08-06

Issues over time

2026-07-30 · 02026-08-02 · 1

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/devwebwacky/triager on 2026-08-09.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

22 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (14)

DALEX dplyr ellmer ggplot2 mice naniar parsnip pROC quarto recipes tibble tidyr workflows yardstick

LinkingTo (0)

none

Suggests (9)

knitr rmarkdown mlbench missForest ranger spelling testthat xgboostMASS

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Uwakmfon Paul

Author, Maintainer, Copyright holder

Authors (1)

Uwakmfon Paul

Author, Maintainer, Copyright holder

Copyright holders (1)

Uwakmfon Paul

Author, Maintainer, Copyright holder

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

0.1.1Latest
2026-08-03 · current release · diff ↗
0.1.0
2026-07-29
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-07-29
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("triageR")

Format

Paul, U. (2026). triageR: Automated Machine Learning and AI Agent Tools for Clinical Prediction Modelling (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.triageR

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for triageR version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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