R Observatory: Metrics for sumExtras version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

sumExtras

1.0.0Package record

Extra Functions for 'gtsummary' Table Styling

0packages depend

2.2Kdownloads / year

91.8%test coverage

13/13flavors OK

Overview

About

Maintained by Kyle GrealisCRAN page ↗GitHub ↗Website ↗Issues ↗

Provides additional convenience functions for 'gtsummary' (Sjoberg et al. (2021) doi:10.32614/RJ-2021-053) & 'gt' tables, including automatic variable labeling from dictionaries, standardized missing value display, and consistent formatting helpers for streamlined table styling workflows.

Changes in 1.0.0

Breaking Changes

Removed apply_labels_from_dictionary(). Use attr(data$var, "label") <- "Label" directly, or the {labelled} package for bulk attribute labeling.

New Features

extras() auto-labeling via options(sumExtras.auto_labels = TRUE) and (recommended) options(sumExtras.prefer_dictionary = TRUE). See vignette("options").
extras() now bolds significant p-values (bold_p()) automatically when p-values are added.
New header parameter in extras() controls the label column header text (default "").
New symbol parameter in clean_table() and extras() controls the missing value replacement string (default "---").
add_group_colors() now accepts a vector of colors (one per group) in addition to a single color for all groups.

Improvements

Data dictionaries now use lowercase column names (variable, description) by convention. Title-case names (Variable, Description) still work — column matching is case-insensitive.
extras() now handles tbl_regression gracefully: overall and pval are silently ignored (regression tables already have model p-values), and bold_p() is applied automatically. No more warnings when using extras() with default arguments on regression tables.
Removed startup message. The package now loads silently.

Show all changes in 1.0.0Hide the rest of the changes in 1.0.0

Dropped {purrr} from Imports (4 dependencies instead of 5).
New vignettes: vignette("options") and vignette("themes").

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("sumExtras", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("kyleGrealis/sumExtras")

Development version from kyleGrealis/sumExtras. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-sumextras

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-sumExtras

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-sumExtras

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 8.6 min · r-release-macos-x86_64

Status changes

OK13 OK2026-08-04
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-07
OK13 OK2026-06-04

Show 4 earlier changesHide 4 earlier changes

ERROR10 OK, 3 ERROR2026-05-29
OK13 OK2026-05-02
ERROR11 OK, 1 ERROR2026-04-25
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.0

READMEYes · 359 wordsVignettesYes · 5 · dynamicNEWSYes · 100% structured · mentions 1.0.0Citation fileYes · computed when R runs itWebsiteYes · pkgdown

Description cites an R Journal article

Help pages: 9 (1 internal)includes a package overview page
Examples that run: 11%1 run in a plain check · 8 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (5)

How these are measured

Downloads

2.2K

CRAN downloads in the past year

Rank #20,169 · ~6/day · ~186/mo

Releases R versions

Daily download trend is not available in this view yet.

26630 days

66190 days

2.2K1 year

Compare downloads with other packages →

Also on60 r2u3 autocran

How downloads are counted

Repository

kylegrealis/sumextras ↗Account: kyleGrealis

8Stars

0Forks

0Open issues

0Open PRs

1Releases

142Commits

1Commit identities

142 commits · Last activity 2026-07-01 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 10
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2025-11-13 · 12026-07-07 · 8

How these are measured

PracticesBeta

7 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/kylegrealis/sumextras on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (3)

pkgdown

GitHub Pages site last deployed 2026-07-01 · The repository has a site deploy workflow

pkgdown site last built 2026-07-01

Automation and maintenance (1)

pre-commit

Lint, format, editor (1)

lintr

How this is detected·Detection ruleset v4 (2026-10-20)

AI coding toolsBeta

This repository shows signs of AI coding tools.

Claude Codefirst seen 2025-11-12
Named in .Rbuildignore: .claude, CLAUDE.md
Named in .gitignore: .claude, CLAUDE.md
Commits: at least 5 crediting it in the message
Gemini CLIfirst seen 2025-12-23
Named in .Rbuildignore: .gemini, GEMINI.md
Named in .gitignore: .gemini, GEMINI.md

Counts are commits, not lines of code. Commits by a tool's accounts count once across all of its accounts. Commits crediting it are the largest count among its credit lines, a minimum.How this is detected·Detection ruleset v4 (updated 2026-09-27)

Dependencies

Declared dependencies

11 external dependencies (excludes base and recommended)

Installing sumExtras adds 63 packages (31 with compiled code, 50 MB of source tarballs). Heaviest: stringi 11 MB, bslib 5.6 MB, gt 3.3 MB.

Depends (1)

R >= 4.1.0

Imports (4)

dplyr gt gtsummary rlang

LinkingTo (0)

none

Suggests (7)

broom broom.helpers knitr labelled survey testthat tibble

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Kyle Grealis

Author, Maintainer since 0.2.0 (2026)

Raymond Balise

Contributor

Daniel Maya

Contributor · added in 0.3.0

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
1.0.0Latest
record
2026-02-11 · current release · diff ↗ ·
removed 1 export
apply_labels_from_dictionary
0.3.0
record
2026-01-22 · diff ↗
0.2.0
record
2026-01-19
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-01-19
Total releases: 3 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 2.4 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("sumExtras")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for sumExtras version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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