scCustomize
Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing
Description
Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
Rd cross-references
Packages unavailable to check Rd xrefs: ‘DropletUtils’, ‘Nebulosa’
package dependencies
Packages suggested but not available for checking: 'dittoSeq', 'DropletUtils', 'Nebulosa'
Check History
NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 27, 2026
package dependencies
Packages suggested but not available for checking: 'dittoSeq', 'DropletUtils', 'Nebulosa'
WARNING 12 OK · 1 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 26, 2026
for missing documentation entries
Failed to query server: Connection timed out All user-level objects in a package should have documentation entries. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual.
package dependencies
Packages suggested but not available for checking: 'dittoSeq', 'DropletUtils', 'Nebulosa'
NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
package dependencies
Packages suggested but not available for checking: 'dittoSeq', 'DropletUtils', 'Nebulosa'