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hdf5r

Interface to the 'HDF5' Binary Data Format

v1.3.12 · Jan 20, 2025 · Apache License 2.0 | file LICENSE
CRAN GitHub Mirror

Description

'HDF5' is a data model, library and file format for storing and managing large amounts of data. This package provides a nearly feature complete, object oriented wrapper for the 'HDF5' API <https://support.hdfgroup.org/documentation/hdf5/latest/_r_m.html> using R6 classes. Additionally, functionality is added so that 'HDF5' objects behave very similar to their corresponding R counterparts.

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CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (3 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is  8.1Mb
  sub-directories of 1Mb or more:
    libs   5.5Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  8.2Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  7.1Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb

Additional Issues

linux-arm64 Details →
rchk Details →

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  8.1Mb
  sub-directories of 1Mb or more:
    libs   5.5Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  8.2Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  7.1Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb

Reverse Dependencies (19)

depends

hdf5r.Extra rblt

imports

cooltools eyetools iCellR ieegio propagate readNSx rliger spatialGE

suggests

CytoSimplex Seurat SignacX dynutils dynwrap iRfcb misty scCustomize scregclust

Dependency Network

Dependencies Reverse dependencies R6 bit64 hdf5r.Extra rblt cooltools eyetools iCellR ieegio propagate readNSx rliger spatialGE CytoSimplex Seurat SignacX dynutils dynwrap +4 more reverse deps hdf5r

Version History

new 1.3.12 Mar 10, 2026
updated 1.3.12 ← 1.3.11 diff Jan 19, 2025
updated 1.3.11 ← 1.3.10 diff Jul 6, 2024
updated 1.3.10 ← 1.3.9 diff Mar 1, 2024
updated 1.3.9 ← 1.3.8 diff Jan 13, 2024
updated 1.3.8 ← 1.3.7 diff Jan 20, 2023
updated 1.3.7 ← 1.3.6 diff Oct 2, 2022
updated 1.3.6 ← 1.3.5 diff Sep 17, 2022
updated 1.3.5 ← 1.3.4 diff Nov 14, 2021
updated 1.3.4 ← 1.3.3 diff Aug 24, 2021
updated 1.3.3 ← 1.3.2 diff Aug 17, 2020
updated 1.3.2 ← 1.3.1 diff Mar 24, 2020
updated 1.3.1 ← 1.3.0 diff Jan 9, 2020
updated 1.3.0 ← 1.2.0 diff Oct 5, 2019
updated 1.2.0 ← 1.1.1 diff Apr 19, 2019
updated 1.1.1 ← 1.0.1 diff Mar 25, 2019
updated 1.0.1 ← 1.0.0 diff Oct 7, 2018
new 1.0.0 Oct 24, 2017