R Observatory: Metrics for runMCMCbtadjust version 1.1.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

runMCMCbtadjust

1.1.3

Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters

0packages depend

2.1Kdownloads / year

0.0%test coverage

13/13checks pass

Overview

About

Maintained by Frédéric GosselinFirst published 2026-03-2410 releasesCRAN page ↗

The function runMCMC_btadjust() returns a mcmc.list object which is the output of a Markov Chain Monte Carlo obtained - from either 'JAGS', 'nimble' or 'greta' - after adjusting burn-in and thinning parameters to meet pre-specified criteria in terms of convergence & effective sample size. Used with 'nimble', runMCMC_btadjust() allows extra calculations (e.g. information criteria for model comparison and goodness-of-fit p-values for model diagnosis).

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("runMCMCbtadjust", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-runmcmcbtadjust

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-runMCMCbtadjust

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-runMCMCbtadjust

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.1 min · r-release-macos-x86_64

Code health

Yes

Tests · ratio 0.07

0.0%

Coverage · measured lines

100%

Documentation · exports

1

Dependencies · direct

Check history

OK2026-08-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-25
7 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 50%
Documented parameters: 61%
Return-value docs: 100%
References docs: 0%

Downloads

2.1K

CRAN downloads in the past year

Rank #9,550 · ~6/day · ~171/mo

Releases R versions

Daily download trend is not available in this view yet.

17130 days

98790 days

2.1K1 year

Compare downloads with other packages →

Also on111 r2u17 autocran

Dependencies

Declared dependencies

16 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (1)

coda

LinkingTo (0)

none

Suggests (16)

nimble rjags runjags greta R6 tensorflow ggmcmc rstan knitr markdown testthat nimbleAPT nimbleHMCparallelHmisc moments

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Frédéric Gosselin

Maintainer, Author

Authors (1)

Frédéric Gosselin

Maintainer, Author

Copyright holders (1)

Institut national de recherche pour l'agriculture, l'alimentation et l'environnement

Copyright holder

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.1.3Latest
2026-03-24 · current release · diff ↗
unarchivedReturned to CRAN
2026-03-24
archivedRemoved from CRAN
2025-11-27
issues were not corrected despite reminders
R
R 4.5.0 released · 2025-04-11
1.1.2
2024-08-28 · diff ↗
1.1.1
2024-06-05 · diff ↗
1.1.0
2024-04-25 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.0.5
2023-12-13 · diff ↗
1.0.4
2023-11-10 · diff ↗
1.0.3
2023-07-20 · diff ↗
1.0.2
2023-07-07 · diff ↗
1.0.1
2023-06-29 · diff ↗
1.0.0
2023-06-19
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2026-03-24
Total releases: 10 / 1 yrs
License: CECILL-2.1
Additional repositories: arthur-f-rossignol.github.io
Minimum R: ≥ 3.5.0
Download size: 286 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("runMCMCbtadjust")

Format

Gosselin, F., & Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, . (2026). runMCMCbtadjust: Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters (Version 1.1.3) [Computer software]. https://doi.org/10.32614/CRAN.package.runMCMCbtadjust

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for runMCMCbtadjust version 1.1.3 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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