R Observatory: Metrics for robber version 0.2.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

robber

0.2.4

Using Block Model to Estimate the Robustness of Ecological Network

0packages depend

2.6Kdownloads / year

59.5%test coverage

13/13checks pass

Overview

About

Maintained by Saint-Clair Chabert-LiddellFirst published 2021-09-203 releasesCRAN page ↗GitHub ↗

Implementation of a variety of methods to compute the robustness of ecological interaction networks with binary interactions as described in doi:10.1002/env.2709. In particular, using the Stochastic Block Model and its bipartite counterpart, the Latent Block Model to put a parametric model on the network, allows the comparison of the robustness of networks differing in species richness and number of interactions. It also deals with networks that are partially sampled and/or with missing values.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("robber", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Chabert-Liddell/robber")

Development version from Chabert-Liddell/robber. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-robber

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-robber

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-robber

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.2 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.16

59.5%

Coverage · measured lines

89%

Documentation · exports

9

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 161 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.6K

CRAN downloads in the past year

Rank #14,678 · ~7/day · ~220/mo

Releases R versions

Daily download trend is not available in this view yet.

19630 days

72590 days

2.6K1 year

Compare downloads with other packages →

Also on110 r2u7 autocran

Repository

GitHub ↗ chabert-liddell/robber

1Stars

0Forks

0Open issues

0Open PRs

2Releases

54Commits

2Contributors

robberrobustnessecological-network

License GPL-3.0 · 54 commits · Last activity 2024-02-07

Stars over time

2024-02-14 · 12026-07-07 · 1

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/chabert-liddell/robber on 2026-08-23.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Show all practices

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

19 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5

Imports (9)

blockmodels ggplot2 GREMLINS igraph magrittr pammtools partitions purrrstats

LinkingTo (0)

none

Suggests (11)

dplyr forcats knitr patchwork pbmcapply RColorBrewer rmarkdown spelling testthat tibble tidyr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Saint-Clair Chabert-Liddell

Author, Maintainer

Authors (1)

Saint-Clair Chabert-Liddell

Author, Maintainer

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.2.4Latest
2024-02-07 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
0.2.3
2023-02-28 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.2.2
2021-09-20
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-09-20
Total releases: 3 / 5 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5
Bundled data: 2.6 KB / 3 files
Download size: 310 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Missing Data

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("robber")

Format

Chabert-Liddell, S. (2024). robber: Using Block Model to Estimate the Robustness of Ecological Network (Version 0.2.4) [Computer software]. https://doi.org/10.32614/CRAN.package.robber

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for robber version 0.2.4 [Data set]. HJJB, LLC. Data release v2026-08-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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