R Observatory: Metrics for ranktreeEnsemble version 0.24

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ranktreeEnsemble

0.24

Ensemble Models of Rank-Based Trees with Extracted Decision Rules

0packages depend

5.4Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Min LuFirst published 2023-08-084 releasesCRAN page ↗GitHub ↗

Fast computing an ensemble of rank-based trees via boosting or random forest on binary and multi-class problems. It converts continuous gene expression profiles into ranked gene pairs, for which the variable importance indices are computed and adopted for dimension reduction. Decision rules can be extracted from trees.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ranktreeEnsemble", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("TransBioInfoLab/ranktreeEnsemble")

Development version from TransBioInfoLab/ranktreeEnsemble. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ranktreeensemble

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ranktreeEnsemble

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ranktreeEnsemble

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.2 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

5

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-22
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 2 earlier snapshots

ERROR2026-04-18
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 22%
Documented parameters: 99%
Return-value docs: 100%
References docs: 89%

Downloads

5.4K

CRAN downloads in the past year

Rank #8,825 · ~15/day · ~452/mo

Releases R versions

Daily download trend is not available in this view yet.

22330 days

1K90 days

5.4K1 year

Compare downloads with other packages →

Also on401 r2u25 autocran

Repository

GitHub ↗ transbioinfolab/ranktreeensemble

2Stars

2Forks

0Open issues

0Open PRs

0Releases

20Commits

1Contributors

20 commits · Last activity 2024-05-24 · 0% stars, 30d

Stars over time

2025-05-01 · 12026-07-07 · 2

Repository practices

Upstream repositoryBeta

Checks run against github.com/transbioinfolab/ranktreeensemble on 2026-08-23.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (5)

Rcpp randomForestSRC gbmmethodsdata.tree

LinkingTo (1)

Rcpp

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Min Lu

Author, Maintainer

Authors (3)

Min Lu

Author, Maintainer

Chen Ye

Author

Ruijie Yin

Author

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.24Latest
2025-09-14 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.23
2024-05-24 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.22
2023-08-18 · diff ↗
0.21
2023-08-08
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-08-08
Total releases: 4 / 3 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.5.0
Bundled data: 545 KB / 1 file
Download size: 566 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ranktreeEnsemble")

Format

Lu, M., Ye, C., & Yin, R. (2025). ranktreeEnsemble: Ensemble Models of Rank-Based Trees with Extracted Decision Rules (Version 0.24) [Computer software]. https://doi.org/10.32614/CRAN.package.ranktreeEnsemble

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ranktreeEnsemble version 0.24 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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