R Observatory: Metrics for peramo version 0.1.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

peramo needs insight (through parameters), which CRAN will archive unless its check problems are fixed by Nov 14.

peramo

0.1.5Package record

Permutation Tests for Randomization Model

0packages depend

5.3Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Duy Nghia PhamCRAN page ↗GitHub ↗Issues ↗

Perform permutation-based hypothesis testing for randomized experiments as suggested in Ludbrook & Dudley (1998) doi:10.2307/2685470 and Ernst (2004) doi:10.1214/088342304000000396, introduced in Pham et al. (2022) doi:10.1016/j.chemosphere.2022.136736.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("peramo", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("phamdn/peramo")

Development version from phamdn/peramo. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-peramo

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-peramo

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-peramo

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.4 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.5

README· In the repository, left out of the releaseVignettesNoNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 12 (1 internal)includes a package overview page
Examples that run: 60%3 run in a plain check · 2 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 56%
Documented parameters: 100%
Return-value docs: 78%
Help pages citing references: 50%

How these are measured

Downloads

5.3K

CRAN downloads in the past year

Rank #12,864 · ~15/day · ~441/mo

Releases R versions

Daily download trend is not available in this view yet.

29230 days

88590 days

5.3K1 year

Compare downloads with other packages →

Also on74 r2u3 autocran

How downloads are counted

Repository

phamdn/peramo ↗Account: phamdn

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2025-09-08

Responsiveness

not measured

How these are measured

PracticesBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/phamdn/peramo on 2026-10-22.

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Installing peramo adds 31 packages (16 with compiled code, 23 MB of source tarballs). Heaviest: lme4 4.3 MB, nloptr 2.1 MB, Rcpp 1.8 MB.

Depends (1)

R >= 4.3.0

Imports (7)

magrittr dplyr lme4 parameters emmeansstatsutils

LinkingTo (0)

none

Suggests (1)

multcompView

Enhances (0)

none

Dependencies facing archival

CRAN will archive these unless their check problems are fixed by the date shown. This package needs each one to install.

insight through parametersfix by Nov 14

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Duy Nghia Pham

Author, Maintainer since 0.1.0 (2022)

Inna M. Sokolova

Thesis advisor

Releases (5)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
0.1.5Latest
record
2025-09-08 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.1.3
record
2023-05-31 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.1.2
record
2023-03-29 · diff ↗ ·
added 2 exports
XY, tw_complex
0.1.1
record
2022-12-19 · diff ↗ ·
added 5 exports
AB, diffcalc, nolesser, twl, twlStat
0.1.0
record
2022-08-10
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-08-10
Total releases: 5 / 4 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.3.0
Bundled data: 37 KB / 2 files
Download size: 98 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("peramo")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1016/j.chemosphere.2022.136736.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for peramo version 0.1.5 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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