pQTLdata
A Collection of Proteome Panels and Metadata
Description
It aggregates protein panel data and metadata for protein quantitative trait locus (pQTL) analysis using 'pQTLtools' (<https://jinghuazhao.github.io/pQTLtools/>). The package includes data from affinity-based panels such as 'Olink' (<https://olink.com/>) and 'SomaScan' (<https://somalogic.com/>), as well as mass spectrometry-based panels from 'CellCarta' (<https://cellcarta.com/>), 'Seer' (<https://seer.bio/>) and 'SWATH-MS' (<doi:10.15252/msb.20178126>). The metadata encompasses updated annotations and publication details.
Downloads
270
Last 30 days
17938th
711
Last 90 days
2.1K
Last year
Trend: +35% (30d vs prior 30d)
0
Last 30 days
34
Last 90 days
131
Last year
Trend: -100% (30d vs prior 30d)
7
Last 7 days
25
Last 30 days
0
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
package dependencies
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
package dependencies
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
ERROR 11 OK · 1 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Mar 10, 2026
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building ‘pQTLdata.Rmd’ using rmarkdown Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75'' Quitting from pQTLdata.Rmd:125-153 [refdata] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ...[truncated]... ment 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found --- failed re-building ‘pQTLdata.Rmd’ SUMMARY: processing the following file failed: ‘pQTLdata.Rmd’ Error: Vignette re-building failed. Execution halted
package dependencies
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
package dependencies
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Code & tests
Open call graph →Code intelligence has not been computed for this package yet.
Code
Structure
Lines of code
1,025
Files
95
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
0
Internal functions
0
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
–
\dontrun example ratio
100%
Roxygen coverage
–
Has pkgdown
No
NEWS present
Yes
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5.0
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
2
First release
2025-03-07
Latest release
2026-03-09
Avg cadence
367 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.