R Observatory: Metrics for neonOS version 1.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

neonOS

1.1.0

Basic Data Wrangling for NEON Observational Data

1packages depend

9.6Kdownloads / year

32.6%test coverage

13/13checks pass

Overview

About

Maintained by Claire LunchFirst published 2022-09-292 releasesCRAN page ↗GitHub ↗

NEON observational data are provided via the NEON Data Portal https://www.neonscience.org and NEON API, and can be downloaded and reformatted by the 'neonUtilities' package. NEON observational data (human-observed measurements, and analyses derived from human-collected samples, such as tree diameters and algal chemistry) are published in a format consisting of one or more tabular data files. This package provides tools for performing common operations on NEON observational data, including checking for duplicates and joining tables.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("neonOS", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("NEONScience/NEON-OS-data-processing")

Development version from NEONScience/NEON-OS-data-processing. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-neonos

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-neonOS

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-neonOS

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.1 min · r-devel-windows-x86_64

Code health

Yes

Tests · ratio 0.02

32.6%

Coverage · measured lines

100%

Documentation · exports

5

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 477 wordsVignettesNopkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 64%

Downloads

9.6K

CRAN downloads in the past year

Rank #6,219 · ~26/day · ~804/mo

Releases R versions

Daily download trend is not available in this view yet.

29930 days

1.3K90 days

9.6K1 year

Compare downloads with other packages →

Also on101 r2u26 autocran157 conda_forge

Repository

GitHub ↗ neonscience/neon-os-data-processing

2Stars

2Forks

1Open issues

0Open PRs

0Releases

67Commits

2Contributors

67 commits · Last activity 2025-11-14

Stars over time

2022-05-10 · 22026-07-07 · 2

Repository practices

Upstream repositoryBeta

Checks run against github.com/neonscience/neon-os-data-processing on 2026-08-23.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.0

Imports (5)

utilsdata.table httr curl jsonlite

LinkingTo (0)

none

Suggests (2)

testthat neonUtilities

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

ecocomDP

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Claire Lunch

Author, Maintainer, Contributor

Authors (4)

Claire Lunch

Author, Maintainer, Contributor

NEON (National Ecological Observatory Network)

Author

Natalie Robinson

Author, Contributor

Eric Sokol

Author, Contributor

Contributors (3)

Claire Lunch

Author, Maintainer, Contributor

Natalie Robinson

Author, Contributor

Eric Sokol

Author, Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.1.0Latest
2024-06-14 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.0.0
2022-09-29
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-09-29
Total releases: 2 / 4 yrs
License: AGPL-3 OSI
Minimum R: ≥ 4.0
Bundled data: 25 KB / 4 files
Download size: 85 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("neonOS")

Format

Lunch, C., NEON (National Ecological Observatory Network), Robinson, N., & Sokol, E. (2024). neonOS: Basic Data Wrangling for NEON Observational Data (Version 1.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.neonOS

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for neonOS version 1.1.0 [Data set]. HJJB, LLC. Data release v2026-08-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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