R Observatory: Metrics for krm version 2022.10-17

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

krm

2022.10-17Package record

Kernel Based Regression Models

0packages depend

2.9Kdownloads / year

38.8%test coverage

13/13flavors OK

Overview

About

Maintained by Youyi FongCRAN page ↗

Implements several methods for testing the variance component parameter in regression models that contain kernel-based random effects, including a maximum of adjusted scores test. Several kernels are supported, including a profile hidden Markov model mutual information kernel for protein sequence. This package is described in Fong et al. (2015) DOI:10.1093/biostatistics/kxu056.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("krm", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-krm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-krm

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-krm

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.8 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2022.10-17

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 12
Examples that run: 75%3 run in a plain check · 1 never run
Exported functions with examples: 44%
Documented parameters: 98%
Return-value docs: 33%
Help pages citing references: 8%

How these are measured

Downloads

2.9K

CRAN downloads in the past year

Rank #9,531 · ~8/day · ~243/mo

Releases R versions

Daily download trend is not available in this view yet.

35030 days

1K90 days

2.9K1 year

Compare downloads with other packages →

Also on363 r2u6 autocran55 c2d4u

How downloads are counted

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Installing krm adds 1 package (1 with compiled code, 209 KB of source tarballs). Heaviest: kyotil 209 KB.

Depends (2)

R >= 3.3.0kyotil

Imports (1)

methods

LinkingTo (0)

none

Suggests (2)

RUnitMASS

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (5)

Youyi Fong

Maintainer since 13.10-31 (2013)

Saheli Datta

Author

Krisztian Sebestyen

Author

Dave Geyer

Contributor · added in 2018.1-24

Steve Park

Contributor · added in 2018.1-24

Releases (10)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
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R 4.4.0 released · 2024-04-24
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R 4.3.0 released · 2023-04-21
2022.10-17Latest
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2022-10-18 · current release · diff ↗
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R 4.2.0 released · 2022-04-22
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R 4.1.0 released · 2021-05-18
2020.5-20
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2020-05-21 · diff ↗
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R 4.0.0 released · 2020-04-24
2019.12-11
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2019-12-10 · diff ↗
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R 3.6.0 released · 2019-04-26
2018.8-17
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2018-08-18 · diff ↗
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R 3.5.0 released · 2018-04-23
2018.1-24
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2018-01-24 · diff ↗
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R 3.4.0 released · 2017-04-21
2016.7-9
record
2016-07-10 · diff ↗

Show 8 earlier eventsHide 8 earlier events

R
R 3.3.0 released · 2016-05-03
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R 3.2.0 released · 2015-04-16
2015.3-4
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2015-03-04 · diff ↗
2014.12-1
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2014-12-02 · diff ↗
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R 3.1.0 released · 2014-04-10
13.11-03
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2013-11-05 · diff ↗
13.10-31
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2013-11-03
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-11-03
Total releases: 10 / 13 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.3.0
Bundled data: 2.8 KB / 2 files
Download size: 44 KB

Appears in task views

Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("krm")

Format

Fong, Y., Datta, S., Geyer, D., Park, S., & Sebestyen, K. (2022). krm: Kernel Based Regression Models (Version 2022.10-17) [Computer software]. https://doi.org/10.32614/CRAN.package.krm

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for krm version 2022.10-17 [Data set]. HJJB, LLC. Data release v2026-10-19. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-19, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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