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inferCSN

Inferring Cell-Specific Gene Regulatory Network

v1.2.0 · Oct 15, 2025 · MIT + file LICENSE

Description

An R package for inferring cell-type specific gene regulatory network from single-cell RNA-seq data.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-macos-arm64

examples

Running examples in ‘inferCSN-Ex.R’ failed
The error most likely occurred in:

> ### Name: inferCSN
> ### Title: inferring cell-type specific gene regulatory network
> ### Aliases: inferCSN inferCSN,matrix-method inferCSN,sparseMatrix-method
> ###   
...[truncated]...
s, all values of the jobs will be affected
ℹ [2026-02-13 15:27:47] Building results
Error in names(output_list) <- x : attempt to set an attribute on NULL
Calls: inferCSN ... check_list_of_data_frames -> obj_check_list -> <Anonymous>
Execution halted

Dependency Network

Dependencies Reverse dependencies cli dplyr ggnetwork ggplot2 ggraph L0Learn Matrix purrr Rcpp thisutils inferCSN

Version History

new 1.2.0 Mar 10, 2026
updated 1.2.0 ← 1.1.7 diff Oct 15, 2025
updated 1.1.7 ← 1.1.6 diff Mar 29, 2025
updated 1.1.6 ← 1.0.8 diff Mar 26, 2025
updated 1.0.8 ← 1.0.5 diff Aug 23, 2024
updated 1.0.5 ← 1.0.3 diff Jun 25, 2024
updated 1.0.3 ← 1.0.1 diff Apr 16, 2024
updated 1.0.1 ← 1.0.0 diff Mar 14, 2024
updated 1.0.0 ← 0.99.9 diff Feb 8, 2024
updated 0.99.9 ← 0.99.8 diff Jan 9, 2024
updated 0.99.8 ← 0.99.7 diff Dec 3, 2023
updated 0.99.7 ← 0.99.6 diff Oct 29, 2023
updated 0.99.6 ← 0.99.0 diff Oct 26, 2023
new 0.99.0 Oct 10, 2023