inferCSN
Inferring Cell-Specific Gene Regulatory Network
v1.2.0
·
Oct 15, 2025
·
MIT + file LICENSE
Description
An R package for inferring cell-type specific gene regulatory network from single-cell RNA-seq data.
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CRAN Check Status
13
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR
r-devel-linux-x86_64-debian-gcc
package dependencies
Packages required but not available: 'ggnetwork', 'ggraph' Packages suggested but not available for checking: 'ggpubr', 'plotly', 'tidygraph' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR
r-devel-windows-x86_64
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/inferCSN.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR
r-devel-macos-arm64
examples
Running examples in ‘inferCSN-Ex.R’ failed The error most likely occurred in: > ### Name: inferCSN > ### Title: inferring cell-type specific gene regulatory network > ### Aliases: inferCSN inferCSN,matrix-method inferCSN,sparseMatrix-method > ### ...[truncated]... s, all values of the jobs will be affected ℹ [2026-02-13 15:27:47] Building results Error in names(output_list) <- x : attempt to set an attribute on NULL Calls: inferCSN ... check_list_of_data_frames -> obj_check_list -> <Anonymous> Execution halted
Dependency Network
Version History
14 tracked
new
1.2.0
Mar 10, 2026
new
0.99.0
Oct 10, 2023