R Observatory: Metrics for incR version 2.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

incR

2.1.1

Analysis of Incubation Data

0packages depend

2.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Pablo Capilla-LasherasFirst published 2017-07-206 releasesCRAN page ↗

Suite of functions to study animal incubation. At the core of incR lies an algorithm that allows for the scoring of incubation behaviour. Additionally, several functions extract biologically relevant metrics of incubation such as off-bout number and off-bout duration - for a review of avian incubation studies, see Nests, Eggs, and Incubation: New ideas about avian reproduction (2015) edited by D. Charles Deeming and S. James Reynolds doi:10.1093/acprof:oso/9780198718666.001.0001.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("incR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-incr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-incR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-incR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.4 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

6

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 141 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.5K

CRAN downloads in the past year

Rank #20,098 · ~7/day · ~209/mo

Releases R versions

Daily download trend is not available in this view yet.

12630 days

54790 days

2.5K1 year

Compare downloads with other packages →

Also on111 r2u18 autocran

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.4.0basestats

Imports (4)

ggplot2 suncalc lubridateutils

LinkingTo (0)

none

Suggests (3)

codetoolsknitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Pablo Capilla-Lasheras

Author, Maintainer

Authors (1)

Pablo Capilla-Lasheras

Author, Maintainer

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
2.1.1Latest
2025-09-18 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
2.1.0
2023-04-18 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.1.0
2018-03-21 · diff ↗
1.0.2
2017-12-11 · diff ↗
1.0.1
2017-10-20 · diff ↗
0.3.1
2017-07-20
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-07-20
Total releases: 6 / 9 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.4.0
Bundled data: 41 KB / 3 files
Download size: 96 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("incR")

Format

Capilla-Lasheras, P. (2025). incR: Analysis of Incubation Data (Version 2.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.incR

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for incR version 2.1.1 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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