R Observatory: Metrics for geocmeans version 0.3.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

geocmeans

0.3.4Package record

Implementing Methods for Spatial Fuzzy Unsupervised Classification

0packages depend

4Kdownloads / year

76.7%test coverage

13/13flavors OK

Overview

About

Maintained by Jeremy GelbCRAN page ↗GitHub ↗Issues ↗

Provides functions to apply spatial fuzzy unsupervised classification, visualize and interpret results. This method is well suited when the user wants to analyze data with a fuzzy clustering algorithm and to account for the spatial dimension of the dataset. In addition, indexes for estimating the spatial consistency and classification quality are proposed. The methods were originally proposed in the field of brain imagery (seed Cai and al. 2007 doi:10.1016/j.patcog.2006.07.011 and Zaho and al. 2013 doi:10.1016/j.dsp.2012.09.016) and recently applied in geography (see Gelb and Apparicio doi:10.4000/cybergeo.36414).

Changes in 0.3.4

Final update before resubmitting to CRAN and to JOSS

Vignettes were removed from CRAN release considering the new NOTE raised and the absolute lack of insights on what could cause it.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("geocmeans", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("JeremyGelb/geocmeans")

Development version from JeremyGelb/geocmeans. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-geocmeans

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-geocmeans

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-geocmeans

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 15.0 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-29
ERROR12 OK, 1 ERROR2026-07-27
OK13 OK2026-06-09

Show 6 earlier changesHide 6 earlier changes

ERROR12 OK, 1 ERROR2026-06-08
WARNING12 OK, 1 WARNING2026-06-07
OK12 OK2026-04-25
NOTE11 OK, 3 NOTE2026-04-22
ERROR10 OK, 3 NOTE, 1 ERROR2026-04-18
NOTE11 OK, 3 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.3.4

READMEYes · 960 wordsVignettesYes · 1 · dynamicNEWSYes · 100% structured · mentions 0.3.4Citation fileYes · cites a publication

Help pages: 114 (69 internal)includes a package overview page
Examples that run: 51%33 run in a plain check · 2 only when donttest examples are enabled (R CMD check --as-cran) · 7 never run · 23 hold no code
Exported functions with examples: 59%
Documented parameters: 100%
Return-value docs: 97%
Help pages citing references: 6% with a bibliography file

Vignettes (1)

Introduction

How these are measured

Downloads

4K

CRAN downloads in the past year

Rank #7,378 · ~11/day · ~337/mo

Releases R versions

Daily download trend is not available in this view yet.

46930 days

1.2K90 days

4K1 year

Compare downloads with other packages →

Also on447 r2u8 autocran

How downloads are counted

Repository

jeremygelb/geocmeans ↗Account: JeremyGelb

29Stars

2Forks

1Open issues

0Open PRs

1Releases

176Commits

2Commit identities

spatial-fuzzy-cmeansfuzzy-classification-algorithmsrunsupervised-learningclusteringspatial-analysiscmeans

License file reads as GPL-2.0 · 176 commits · Last activity 2026-04-19 · 0% stars, 30d · Default branch at 0.3.4.1.9000, ahead of CRAN 0.3.4 (checked 2026-10-21)

Responsiveness

How these are sampled

PRs merged (all time): not measured
Median days to close, 50 most recently updated closed issues: 8
Median days to close, 50 most recently updated closed PRs: not measured

Stars over time

2025-02-26 · 282026-07-07 · 29

How these are measured

PracticesBeta

12 development-tooling and community-health practices detected across 8 families in the upstream repository

Checks run against github.com/jeremygelb/geocmeans on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Governance and community (2)

Code of conductContributing guide

Docs source (3)

pkgdown

GitHub Pages site last deployed 2026-04-19 · The repository has a site deploy workflow

Coverage (1)

Coverage reporting (Codecov)

Show all practicesHide 4 practices

CRAN release process (1)

cran-comments.md

Research and citation (1)

codemeta.json

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

39 external dependencies (excludes base and recommended)

Installing geocmeans adds 146 packages (78 with compiled code, 158 MB of source tarballs). Heaviest: BH 14 MB, stringi 11 MB, sf 9.3 MB.

Depends (1)

R >= 3.5

Imports (21)

ggplot2 tmap spdep reldist dplyr fclust fmsb (>= 0.7.0)future.apply progressr reshape2statsgrDevicesshiny (>= 1.6.0)sf leaflet plotly Rdpack matrixStatsmethodsterra Rcpp

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (19)

knitr rmarkdown markdown future ppclust ClustGeo car rgl ggpubr RColorBrewer (>= 1.1-2)kableExtra viridis testthat (>= 3.0.0)bslib shinyWidgets shinyhelper waiter classInt covr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Jeremy Gelb

Author, Maintainer since 0.1.1 (2021)

Philippe Apparicio

Contributor

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.3.4Latest
record
2023-09-12 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
0.3.3
record
2023-02-07 · diff ↗
0.3.2
record
2023-01-08 · diff ↗ ·
added 2 exports
load_arcachon, standardizer
0.3.1
record
2022-10-16 · diff ↗
0.2.2
record
2022-06-16 · diff ↗ ·
removed 2 exports
Elsa_categorical_matrix, moranI_matrix
R
R 4.2.0 released · 2022-04-22
0.2.0
record
2021-08-23 · diff ↗ ·
added 41 exports
Elsa_categorical_matrix, Elsa_categorical_matrix_window, Elsa_fuzzy_matrix_window, FCMres, add_matrices_bycol, adj_spconsist_arr_window_globstd, boot_group_validation, boot_group_validation.mc, calcCalinskiHarabasz, calcDaviesBouldin, calcEuclideanDistance2, calcEuclideanDistance3, calcGD43, calcGD53, calcNegentropyI, calcUncertaintyIndex, circular_window, div_matrices_bycol, focal_adj_mean_arr_window, focal_euclidean_arr_window, focal_euclidean_list, focal_euclidean_mat_window, groups_matching, local_moranI_matrix_window, max_mat, moranI_matrix, moranI_matrix_window, pow_matrix_bycol, power_mat, predict_membership and 11 more
R
R 4.1.0 released · 2021-05-18
0.1.1
record
2021-04-21
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-04-21
Total releases: 7 / 5 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.5
Bundled data: 678 KB / 1 file
Download size: 3.7 MB

Cite

Cite this package

Run in R for the authors' entry:

citation("geocmeans")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.4000/cybergeo.36414.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for geocmeans version 0.3.4 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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