R Observatory: Metrics for geer version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

geer

0.1.0Package record

Bias-Reduced and Penalized Generalized Estimating Equations

0packages depend

1.3Kdownloads / year

86.3%test coverage

13/13flavors OK

Overview

About

Maintained by Anestis TouloumisCRAN page ↗GitHub ↗Issues ↗

Fits marginal regression models for repeated or clustered responses using generalized estimating equations (GEE). Provides ordinary GEE estimators, bias-reduced and bias-corrected GEE estimators, and Jeffreys-type penalized GEE estimators for binary, count and continuous responses. Methods are described in Touloumis (2026a) doi:10.48550/arXiv.2606.16043 and Touloumis (2026b) doi:10.48550/arXiv.2606.16058.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("geer", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("AnestisTouloumis/geer")

Development version from AnestisTouloumis/geer. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-geer

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-geer

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-geer

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 6.4 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK8 OK2026-06-24

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.0

READMEYes · 461 wordsVignettesNoNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 30 (1 internal)includes a package overview page
Examples that run: 96%27 run in a plain check (1 of them under a condition) · 1 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 88%
Documented parameters: 99%
Return-value docs: 88%
Help pages citing references: 60%

How these are measured

Downloads

1.3K

CRAN downloads in the past year

Rank #11,326 · ~4/day · ~112/mo

Releases R versions

Daily download trend is not available in this view yet.

30930 days

95090 days

1.3K1 year

Compare downloads with other packages →

Also on59 r2u1 autocran

How downloads are counted

Repository

anestistouloumis/geer ↗Account: AnestisTouloumis

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2026-10-24 · Default branch at 0.1.1, ahead of CRAN 0.1.0 (checked 2026-10-22)

Responsiveness

not measured

How these are measured

PracticesBeta

6 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/anestistouloumis/geer on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (1)

README.Rmd

Coverage (1)

Coverage reporting (Codecov)

Reproducibility and dev environment (1)

data-raw/

Show all practicesHide 1 practice

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Installing geer adds 8 packages (5 with compiled code, 5.5 MB of source tarballs). Heaviest: brglm2 2.3 MB, Rcpp 1.8 MB, RcppArmadillo 1.0 MB.

Depends (1)

R >= 4.0.0

Imports (3)

brglm2 generics Rcpp

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (5)

covr emmeans estimability testthat tibble

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (1)

Anestis Touloumis

Author, Maintainer since 0.1.0 (2026)

Releases (1)

0.1.0Latest
record
2026-06-23 · current release
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-06-23
Total releases: 1 / 1 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0.0
Bundled data: 5.8 KB / 7 files
Download size: 127 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("geer")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for geer version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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