R Observatory: Metrics for gap.datasets version 0.0.6

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

gap.datasets

0.0.6Package record

Datasets for 'gap'

2packages depend

261.7Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Jing Hua ZhaoCRAN page ↗Website ↗

Datasets associated with the 'gap' package. Currently, it includes an example data for regional association plot (CDKN), an example data for a genomewide association meta-analysis (OPG), data in studies of Parkinson's diease (PD), ALHD2 markers and alcoholism (aldh2), APOE/APOC1 markers and Schizophrenia (apoeapoc), cystic fibrosis (cf), a Olink/INF panel (inf1), Manhattan plots with (hr1420, mhtdata) and without (w4) gene annotations.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("gap.datasets", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-gap.datasets

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-gap.datasets

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-gap.datasets

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 50 s · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.0.6

READMEYes · 58 wordsVignettesNoNEWSNoCitation fileNoWebsiteYes

Help pages: 22
Examples that run: 71%5 run in a plain check · 2 never run
Exported functions with examples: not tracked
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 41%

How these are measured

Downloads

261.7K

CRAN downloads in the past year

Rank #698 · ~717/day · ~21.8K/mo

Releases R versions

Daily download trend is not available in this view yet.

22.8K30 days

75.5K90 days

261.7K1 year

Compare downloads with other packages →

Also on1.7K r2u9 autocran4.2K conda_forge166 c2d4u

How downloads are counted

Repository

jinghuazhao/r ↗Account: jinghuazhao

13Stars

4Forks

5Open issues

0Open PRs

0Releases

3,002Commits

4Commit identities

geneticslmmimputation

3,002 commits · Last activity 2026-09-29 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 0
Median days to close, 50 most recently updated closed PRs: 1

Stars over time

2024-03-15 · 122026-07-07 · 13

How these are measured

PracticesBeta

4 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/jinghuazhao/r on 2026-10-11.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on macOS

Docs source (2)

GitHub Pages site last deployed 2026-09-29 · The repository has a site deploy workflow

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Installing gap.datasets adds no packages beyond those that come with R.

Depends (1)

R >= 2.10

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

15indirect

Depends 1 · Imports 1

Depends, Imports or LinkingTo, most downloaded first

gap gaawr2

How these are counted

Code & Tests

Datasets

People & History

People (2)

Jing Hua Zhao

Author, Maintainer · added in 0.0.5

Swetlana Herbrandt

Contributor · added in 0.0.5

Maintainer since 0.0.2 (2017)

Listed in earlier versions (1)

Jing Hua Zhao with suggestions from R-Core

no longer listed · 0.0.2 to 0.0.4

Releases (4)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.0.6Latest
record
2023-08-25 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
0.0.5
record
2022-05-09 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.0.4
record
2019-06-03 · diff ↗
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.0.2
record
2017-11-27
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-11-27
Total releases: 4 / 9 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 2.10
Bundled data: 2.3 MB / 23 files
Download size: 2.3 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("gap.datasets")

Format

Zhao, J. H., & Herbrandt, S. (2023). gap.datasets: Datasets for 'gap' (Version 0.0.6) [Computer software]. https://doi.org/10.32614/CRAN.package.gap.datasets

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for gap.datasets version 0.0.6 [Data set]. HJJB, LLC. Data release v2026-10-17. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-17, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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