R Observatory: Metrics for enmSdmX version 1.2.12

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

enmSdmX

1.2.12Package record

Species Distribution Modeling and Ecological Niche Modeling

0packages depend

5.1Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Adam B. SmithCRAN page ↗GitHub ↗Issues ↗

Implements species distribution modeling and ecological niche modeling, including: bias correction, spatial cross-validation, model evaluation, raster interpolation, biotic "velocity" (speed and direction of movement of a "mass" represented by a raster), interpolating across a time series of rasters, and use of spatially imprecise records. The heart of the package is a set of "training" functions which automatically optimize model complexity based number of available occurrences. These algorithms include MaxEnt, MaxNet, boosted regression trees/gradient boosting machines, generalized additive models, generalized linear models, natural splines, and random forests. To enhance interoperability with other modeling packages, no new classes are created. The package works with 'PROJ6' geodetic objects and coordinate reference systems.

Changes in 1.2.12

Fixed bug that sometimes appeared in coordImprecision() because output included units :(.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("enmSdmX", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("adamlilith/enmSdmX")

Development version from adamlilith/enmSdmX. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-enmsdmx

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-enmSdmX

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-enmSdmX

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.3 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-04-06
ERROR13 OK, 1 ERROR2026-04-04
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.2.12

READMEYes · 1,079 wordsVignettesNoNEWSYes · 100% structured · mentions 1.2.12Citation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 64 (6 internal)includes a package overview page
Examples that run: 72%41 run in a plain check · 14 only when donttest examples are enabled (R CMD check --as-cran) · 2 never run
Exported functions with examples: 100%
Documented parameters: 94%
Return-value docs: 100%
Help pages citing references: 22%

How these are measured

Downloads

5.1K

CRAN downloads in the past year

Rank #6,627 · ~14/day · ~421/mo

Releases R versions

Daily download trend is not available in this view yet.

56230 days

1.3K90 days

5.1K1 year

Compare downloads with other packages →

Also on98 r2u8 autocran

How downloads are counted

Repository

adamlilith/enmsdmx ↗Account: adamlilith

30Stars

3Forks

0Open issues

1Open PRs

2Releases

289Commits

2Commit identities

bias-correctionbiogeographyecological-niche-modellingniche-modelingniche-modellingspecies-distribution-modelingecological-niche-modeling

289 commits · Last activity 2025-02-20 · 0% stars, 30d · The default branch showed an older version (1.2.11) than CRAN on 2026-10-21

Responsiveness

How these are sampled

PRs merged (all time): 96%
Median days to close, 50 most recently updated closed issues: 44
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2025-06-30 · 242026-08-25 · 30

How these are measured

PracticesBeta

4 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/adamlilith/enmsdmx on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Installing enmSdmX adds 93 packages (53 with compiled code, 92 MB of source tarballs). Heaviest: sf 9.3 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (1)

R >= 4.0.0

Imports (27)

AICcmodavgbootcowplot data.table doParallel DT foreach gbm ggplot2graphicsks maxnetmethodsmgcvomnibusparallelpredicts ranger rJava scales sf shiny sp statisfactorystatsterrautils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (1)

Adam B. Smith

Maintainer since 1.0.0 (2022), Author

Listed in earlier versions (1)

Smith

no longer listed · 1.2.10 to 1.2.12

Releases (12)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.2.12Latest
record
2025-03-29 · current release · diff ↗ ·
added 1 export
responseCurves
1.2.10
record
2024-12-11 · diff ↗
1.1.9
record
2024-11-03 · diff ↗
1.1.6
record
2024-06-14 · diff ↗
1.1.5
record
2024-05-17 · diff ↗ ·
added 1 export
trainESM
R
R 4.4.0 released · 2024-04-24
1.1.2
record
2023-09-08 · diff ↗ ·
added 1 export
geoFoldContrast
1.0.6
record
2023-05-23 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.0.4
record
2023-04-19 · diff ↗
1.0.3
record
2023-03-10 · diff ↗
1.0.2
record
2023-03-04 · diff ↗
1.0.1
record
2023-01-26 · diff ↗
1.0.0
record
2022-12-12

Show 1 earlier eventHide 1 earlier event

R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-12-12
Total releases: 12 / 4 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.0.0
Bundled data: 325 KB / 4 files
Download size: 1.3 MB

Cite

Cite this package

Run in R for the authors' entry:

citation("enmSdmX")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1111/geb.13628.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for enmSdmX version 1.2.12 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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