duckh3

r-oldrel-macos-x86_64, r-release-macos-x86_64

Running examples in ‘duckh3-Ex.R’ failed
The error most likely occurred in:

> ### Name: ddbh3_get_child_pos
> ### Title: Get the position of an H3 cell within its parent
> ### Aliases: ddbh3_get_child_pos
> 
> ### ** Examples
> 
> ## Load needed packages
> library(duckh3)
> library(dplyr)

Attaching package: ‘dplyr’

The following objects are masked from ‘package:stats’:

    filter, lag

The following objects are masked from ‘package:base’:

    intersect, setdiff, setequal, union

> 
> ## Setup the default connection with h3 and spatial extensions
> ## This is a mandatory step to use duckh3 functions
> ddbh3_default_conn(threads = 1)
duckdb is storing downloaded extensions and secrets under ~/.duckdb:
ℹ /Users/urbanek/.duckdb
This persists across sessions and is shared with the DuckDB CLI and other clients.
ℹ Run duckdb(shared_home = FALSE) to use a temporary directory instead.
ℹ See ?duckdb_storage for details and alternatives.
Error in `value[[3L]]()`:
! Failed to load the h3 exte
...[truncated]...
ble architecture (have 'arm64', need
  'x86_64h' or 'x86_64')),
  '/System/Volumes/Preboot/Cryptexes/OS/Users/urbanek/.duckdb/extensions/v1.5.6/osx_amd64/h3.duckdb_extension'
  (no such file),
  '/Users/urbanek/.duckdb/extensions/v1.5.6/osx_amd64/h3.duckdb_extension'
  (mach-o file, but is an incompatible architecture (have 'arm64', need
  'x86_64h' or 'x86_64')) ℹ Context: rapi_execute ℹ Error type: IO
ℹ The binary may be corrupt or incompatible with this platform/DuckDB version.
ℹ Try reinstalling with `ddbs_install(extension = 'h3', upgrade = TRUE)`
Backtrace:
    ▆
 1. └─duckh3::ddbh3_default_conn(threads = 1)
 2.   └─duckspatial::ddbs_load(conn, quiet = TRUE, extension = "h3")
 3.     └─base::tryCatch(...)
 4.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 5.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 6.           └─value[[3L]](cond)
 7.             └─cli::cli_abort(...)
 8.               └─rlang::abort(...)
Execution halted

r-devel-linux-x86_64-fedora-clang

Running examples in ‘duckh3-Ex.R’ failed
The error most likely occurred in:

> ### Name: ddbh3_get_child_pos
> ### Title: Get the position of an H3 cell within its parent
> ### Aliases: ddbh3_get_child_pos
> 
> ### ** Examples
> 
> ## Load needed packages
> library(duckh3)
> library(dplyr)

Attaching package: ‘dplyr’

The following objects are masked from ‘package:stats’:

    filter, lag

The following objects are masked from ‘package:base’:

    intersect, setdiff, setequal, union

> 
> ## Setup the default connection with h3 and spatial extensions
> ## This is a mandatory step to use duckh3 functions
> ddbh3_default_conn(threads = 1)
duckdb is storing downloaded extensions and secrets under ~/.duckdb:
ℹ /data/localhost/ripley/.duckdb
This persists across sessions and is shared with the DuckDB CLI and other clients.
ℹ Run duckdb(shared_home = FALSE) to use a temporary directory instead.
ℹ See ?duckdb_storage for details and alternatives.
duckdb was built with libc++ (not libstdc++) o
...[truncated]...
! Failed to load the spatial extension.
✖ DuckDB extension loading (INSTALL / LOAD) is disabled for this driver. ℹ
  Recreate the driver with duckdb(allow_extensions = TRUE) to enable it (this
  may crash R on a Linux build not compiled with libstdc++; see
  https://github.com/duckdb/duckdb-r/issues/1107). ℹ See ?duckdb for details. ℹ
  Context: load_extension
ℹ The binary may be corrupt or incompatible with this platform/DuckDB version.
ℹ Try reinstalling with `ddbs_install(extension = 'spatial', upgrade = TRUE)`
Backtrace:
    ▆
 1. └─duckh3::ddbh3_default_conn(threads = 1)
 2.   └─duckspatial::ddbs_create_conn(...)
 3.     └─duckspatial::ddbs_load(conn, quiet = TRUE)
 4.       └─base::tryCatch(...)
 5.         └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 6.           └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 7.             └─value[[3L]](cond)
 8.               └─cli::cli_abort(...)
 9.                 └─rlang::abort(...)
Execution halted

r-oldrel-macos-x86_64, r-release-macos-x86_64

Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(duckh3)
  > 
  > test_check("duckh3")
  duckdb is storing downloaded extensions and secrets under ~/.duckdb:
  ℹ /Users/urbanek/.duckdb
  This persists across sessions and is shared with the DuckDB CLI and other clients.
  ℹ Run duckdb(shared_home = FALSE) to use a temporary directory instead.
  ℹ See ?duckdb_storage for details and alternatives.
  Error in `source_dir()`:
  ! Failed to evaluate './setup.R'.
  Caused by error in `value[[3L]]()`:
  ! Failed to load the h3 extension.
  ✖ IO Error: Ext
...[truncated]...
R]$", env = env, wrap = FALSE)
    8.               └─base::lapply(...)
    9.                 └─testthat (local) FUN(X[[i]], ...)
   10.                   └─testthat::source_file(...)
   11.                     ├─base::withCallingHandlers(...)
   12.                     └─base::eval(exprs, env)
   13.                       └─base::eval(exprs, env)
   14.                         └─duckh3::ddbh3_default_conn() at ./setup.R:12:1
   15.                           └─duckspatial::ddbs_load(conn, quiet = TRUE, extension = "h3")
   16.                             └─base::tryCatch(...)
   17.                               └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   18.                                 └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   19.                                   └─value[[3L]](cond)
   20.                                     └─cli::cli_abort(...)
   21.                                       └─rlang::abort(...)
  Execution halted

r-devel-linux-x86_64-fedora-clang

Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(duckh3)
  > 
  > test_check("duckh3")
  duckdb is storing downloaded extensions and secrets under ~/.duckdb:
  ℹ /data/localhost/ripley/.duckdb
  This persists across sessions and is shared with the DuckDB CLI and other clients.
  ℹ Run duckdb(shared_home = FALSE) to use a temporary directory instead.
  ℹ See ?duckdb_storage for details and alternatives.
  duckdb was built with libc++ (not libstdc++) on Linux, so DuckDB extensions are disabled:
  • Loading a prebuilt (libstdc++) extension could crash R (htt
...[truncated]...
(...)
    9.                 └─testthat (local) FUN(X[[i]], ...)
   10.                   └─testthat::source_file(...)
   11.                     ├─base::withCallingHandlers(...)
   12.                     └─base::eval(exprs, env)
   13.                       └─base::eval(exprs, env)
   14.                         └─duckh3::ddbh3_default_conn() at ./setup.R:12:1
   15.                           └─duckspatial::ddbs_create_conn(...)
   16.                             └─duckspatial::ddbs_load(conn, quiet = TRUE)
   17.                               └─base::tryCatch(...)
   18.                                 └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   19.                                   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   20.                                     └─value[[3L]](cond)
   21.                                       └─cli::cli_abort(...)
   22.                                         └─rlang::abort(...)
  Execution halted