R Observatory: Metrics for dataquieR version 2.8.9

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

dataquieR

2.8.9

Data Quality in Epidemiological Research

0packages depend

8.9Kdownloads / year

–test coverage

8/13checks pass

Overview

About

Maintained by Stephan StruckmannFirst published 2021-01-2617 releasesCRAN page ↗GitLab ↗

Data quality assessments guided by a 'data quality framework introduced by Schmidt and colleagues, 2021' doi:10.1186/s12874-021-01252-7 target the data quality dimensions integrity, completeness, consistency, and accuracy. The scope of applicable functions rests on the availability of extensive metadata which can be provided in spreadsheet tables. Either standardized (e.g. as 'html5' reports) or individually tailored reports can be generated. For an introduction into the specification of corresponding metadata, please refer to the 'package website' https://dataquality.qihs.uni-greifswald.de/VIN_Annotation_of_Metadata.html.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("dataquieR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("libreumg/dataquier")

Development version from libreumg/dataquier. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-dataquier

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-dataquieR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-dataquieR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

5NOTE8OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64

Slowest check: 14.2 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 3.16

not tracked

Coverage

100%

Documentation · exports

21

Dependencies · direct

Check history

NOTE2026-07-16
10 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-10
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-07-04
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-07-03
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-27
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 13 earlier snapshots

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-06-06
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-04
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-15
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-05-12
11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE
OK2026-05-07
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-30
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-28
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-23
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-22
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 444 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 3%
Documented parameters: 93%
Return-value docs: 67%
References docs: 0%

Downloads

8.9K

CRAN downloads in the past year

Rank #4,461 · ~24/day · ~743/mo

Releases R versions

Daily download trend is not available in this view yet.

39730 days

1.7K90 days

8.9K1 year

Compare downloads with other packages →

Also on256 r2u35 autocran

Repository

GitLab ↗ libreumg/dataquier

Repository practices

Upstream repositoryBeta

Repository gitlab.com/libreumg/dataquier is linked, but repository-practices checks have not run for it yet. Checks are GitHub-only for now.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

58 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.6.0

Imports (21)

dplyr emmeans ggplot2 lme4 lubridateMASSparallelMap patchwork R.devices rlang robustbase qmrparserutilsrio readr scales withr lifecycle unitsmethodshms

LinkingTo (0)

none

Suggests (45)

S7 cowplotgridopenxlsx2grDevicesjsonlite cli whoami DT htmltools knitr markdownparallelparallelly rmarkdown rstudioapi testthat (>= 3.1.9)tibble vdiffr pkgload Rdpack callr colorspace plotly htmlwidgets future processx R6 shiny xml2mgcvrvest textutils dbx grImport2 rsvg stringdist rankICCnnetordinal storr reticulate stringi lobstr visNetwork

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (10)

Maintainer (1)

Stephan Struckmann

Author, Maintainer

Authors (6)

Stephan Struckmann

Author, Maintainer

Elisa Kasbohm

Author · added in 1.0.11

Joany Marino

Author · added in 1.0.11

Adrian Richter

Author

Elena Salogni

Author · added in 2.1.0

Carsten Oliver Schmidt

Author

Copyright holders (1)

University Medicine Greifswald

Copyright holder · added in 1.0.5

Funders (3)

European Union’s Horizon 2020 programme (euCanSHare, grant agreement No. 825903)

Funder · added in 1.0.11

German Research Foundation (DFG SCHM 2744/3-1, SCHM 2744/9-1, SCHM 2744/3-4)

Funder · added in 2.0.0

National Research Data Infrastructure for Personal Health Data: (NFDI 13/1)

Funder · added in 2.0.0

Listed in earlier versions (1)

German Research Foundation (DFG SCHM 2744/3-1)

no longer listed · 1.0.11 to 1.0.13

Package Timeline

17 releases. Pick two to compare their code metrics. R releases are shown for context.

2.8.9Latest
2026-05-12 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
2.8.7
2026-01-08 · diff ↗
2.8.2
2025-12-23 · diff ↗
R
R 4.5.0 released · 2025-04-11
2.5.1
2025-03-05 · diff ↗
2.5.0
2025-02-20 · diff ↗
R
R 4.4.0 released · 2024-04-24
2.1.0
2024-03-29 · diff ↗
2.0.1
2023-07-19 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.0.0
2023-03-01 · diff ↗
1.0.13
2022-11-16 · diff ↗
1.0.12
2022-11-11 · diff ↗
1.0.11
2022-10-11 · diff ↗
1.0.10
2022-08-31 · diff ↗

Show 8 earlier events

R
R 4.2.0 released · 2022-04-22
1.0.9
2021-09-03 · diff ↗
1.0.8
2021-08-12 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.0.5
2021-02-26 · diff ↗
1.0.4
2021-02-02 · diff ↗
1.0.3
2021-01-26
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-01-26
Total releases: 17 / 5 yrs
License: BSD_2_clause + file LICENSE OSI
Minimum R: ≥ 3.6.0
Download size: 3.2 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Epidemiology

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("dataquieR")

Format

Struckmann, S., European Union’s Horizon 2020 programme (euCanSHare, grant agreement No. 825903), German Research Foundation (DFG SCHM 2744/3-1, SCHM 2744/9-1, SCHM 2744/3-4), National Research Data Infrastructure for Personal Health Data: (NFDI 13/1), University Medicine Greifswald, Kasbohm, E., Marino, J., Richter, A., Salogni, E., & Schmidt, C. O. (2026). dataquieR: Data Quality in Epidemiological Research (Version 2.8.9) [Computer software]. https://doi.org/10.32614/CRAN.package.dataquieR

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for dataquieR version 2.8.9 [Data set]. HJJB, LLC. Data release v2026-08-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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