R Observatory: Metrics for damr version 0.3.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

damr

0.3.8

Interface to Drosophila Activity Monitor System Result Files

1packages depend

9.7Kdownloads / year

91.6%test coverage

13/13checks pass

Overview

About

Maintained by Quentin GeissmannFirst published 2018-05-155 releasesCRAN page ↗GitHub ↗

Loads behavioural data from the widely used Drosophila Activity Monitor System (DAMS, TriKinetics https://trikinetics.com/) into the rethomics framework.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("damr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("rethomics/damr")

Development version from rethomics/damr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-damr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-damr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-damr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.1 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 7.62

91.6%

Coverage · measured lines

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 89%
Return-value docs: 75%
References docs: 33%

Downloads

9.7K

CRAN downloads in the past year

Rank #4,891 · ~27/day · ~808/mo

Releases R versions

Daily download trend is not available in this view yet.

44930 days

1.6K90 days

9.7K1 year

Compare downloads with other packages →

Also on106 r2u23 autocran

Repository

GitHub ↗ rethomics/damr

7Stars

7Forks

16Open issues

2Open PRs

1Releases

1,338Commits

4Contributors

rparsingbiological-data-analysis

1,338 commits · Last activity 2025-04-21 · 0% stars, 30d

Stars over time

2024-05-31 · 62026-07-07 · 7

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/rethomics/damr on 2026-08-16.

Continuous integration (1)

Travis CI

Reproducibility and dev environment (1)

Makefile

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Show all practices

Git structural (1)

Submodules

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.00behavr data.table

Imports (1)

readr

LinkingTo (0)

none

Suggests (5)

testthat covr knitr ggetho zeitgebr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

zeitgebr

Code & Tests

Datasets

People & History

People (2)

Maintainer (1)

Quentin Geissmann

Author, Maintainer

Authors (2)

Quentin Geissmann

Author, Maintainer

Hadley Wickham

Author

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.3.8Latest
2025-04-21 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.3.7
2020-11-16 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.3.4
2019-07-15 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.3.3
2019-04-08 · diff ↗
0.3.1
2018-05-15
R
R 3.5.0 released · 2018-04-23

Package metadata

First published: 2018-05-15
Total releases: 5 / 8 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.00
Bundled data: 0.8 KB / 2 files
Download size: 257 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("damr")

Format

Geissmann, Q., & Wickham, H. (2025). damr: Interface to Drosophila Activity Monitor System Result Files (Version 0.3.8) [Computer software]. https://doi.org/10.32614/CRAN.package.damr

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for damr version 0.3.8 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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