R Observatory: Metrics for ctmm version 1.3.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ctmm

1.3.0

Continuous-Time Movement Modeling

4packages depend

42.6Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Christen H. FlemingFirst published 2015-07-3129 releasesCRAN page ↗GitHub ↗

Functions for identifying, fitting, and applying continuous-space, continuous-time stochastic-process movement models to animal tracking data. The package is described in Calabrese et al (2016) doi:10.1111/2041-210X.12559, with models and methods based on those introduced and detailed in Fleming & Calabrese et al (2014) doi:10.1086/675504, Fleming et al (2014) doi:10.1111/2041-210X.12176, Fleming et al (2015) doi:10.1103/PhysRevE.91.032107, Fleming et al (2015) doi:10.1890/14-2010.1, Fleming et al (2016) doi:10.1890/15-1607, Péron & Fleming et al (2016) doi:10.1186/s40462-016-0084-7, Fleming & Calabrese (2017) doi:10.1111/2041-210X.12673, Péron et al (2017) doi:10.1002/ecm.1260, Fleming et al (2017) doi:10.1016/j.ecoinf.2017.04.008, Fleming et al (2018) doi:10.1002/eap.1704, Winner & Noonan et al (2018) doi:10.1111/2041-210X.13027, Fleming et al (2019) doi:10.1111/2041-210X.13270, Noonan & Fleming et al (2019) doi:10.1186/s40462-019-0177-1, Fleming et al (2020) doi:10.1101/2020.06.12.130195, Noonan et al (2021) doi:10.1111/2041-210X.13597, Fleming et al (2022) doi:10.1111/2041-210X.13815, Silva et al (2022) doi:10.1111/2041-210X.13786, Alston & Fleming et al (2023) doi:10.1111/2041-210X.14025.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ctmm", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("ctmm-initiative/ctmm")

Development version from ctmm-initiative/ctmm. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ctmm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ctmm

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ctmm

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 30.1 min · r-oldrel-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

94%

Documentation · exports

24

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-06-08
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 99 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 33% structuredCode of conductNoContributing guideNo

Examples that run: 52%
Documented parameters: 100%
Return-value docs: 95%
References docs: 98%

Downloads

42.6K

CRAN downloads in the past year

Rank #2,821 · ~117/day · ~3.5K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.3K30 days

5.3K90 days

42.6K1 year

Compare downloads with other packages →

Also on317 r2u24 autocran126 c2d4u

Repository

GitHub ↗ ctmm-initiative/ctmm

59Stars

16Forks

9Open issues

3Open PRs

1Releases

917Commits

6Contributors

917 commits · Last activity 2026-08-01 · +5.4% stars, 30d

Stars over time

2025-04-01 · 522026-08-08 · 59

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/ctmm-initiative/ctmm on 2026-08-16.

Lint, format, editor (1)

RStudio project

Governance and community (1)

Funding

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

28 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (24)

Bessel data.table digest expm fasttime GmediangraphicsgrDevicesgsl manipulateMASSmethodsnumDeriv parsedate pbivnorm pracma raster shape sf sp statmodstatsterrautils

LinkingTo (0)

none

Suggests (11)

animation bit64 dplyr fftw knitr moveparallelquadprog rmarkdown suncalc testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

4direct

0indirect

amt movedesign move trackdf

Code & Tests

People & History

People (18)

Maintainer (1)

Christen H. Fleming

Author, Maintainer · added in 0.3.4

Authors (2)

Christen H. Fleming

Author, Maintainer · added in 0.3.4

Justin M. Calabrese

Author

Contributors (9)

Xianghui Dong

Contributor · added in 0.3.6

Eliezer Gurarie

Contributor · added in 0.3.5

Bart Kranstauber

Contributor · added in 0.3.5

Michael J. Noonan

Contributor

Guillaume Péron

Contributor · added in 0.3.5

Björn Reineking

Contributor · added in 1.0.0

Kamran Safi

Contributor · added in 0.3.5

Chad J. Wilhite

Contributor

Show 1 more contributors

Kevin Winner

Contributor · added in 0.3.5

Other (7)

Thomas Akre

Data contributor · added in 0.5.0

Paul C. Cross

Data contributor

Jonathan Drescher-Lehman

Data contributor · added in 0.5.0

Autumn-Lynn Harrison

Data contributor · added in 0.5.8

Ronaldo G. Morato

Data contributor · added in 0.5.9

Thomas Mueller

Data contributor · added in 0.3.5

Rogério C. de Paula

Data contributor

Listed in earlier versions (9)

J. M. Calabrese

no longer listed · 0.2.7 to 0.3.4

Chris H. Fleming

no longer listed · 0.2.7 to 0.3.3

Paul C.

no longer listed · 0.3.5 to 1.3.0

Christen H.

no longer listed · 0.3.5 to 1.3.0

Justin M.

no longer listed · 0.3.5 to 1.3.0

Rogério C.

no longer listed · 0.5.0 to 1.3.0

Michael J.

no longer listed · 0.5.1 to 1.3.0

Ronaldo G.

no longer listed · 1.0.0 to 1.3.0

Package Timeline

29 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.3.0Latest
2025-07-27 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.2.0
2023-09-24 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.1.0
2022-11-04 · diff ↗
1.0.0
2022-07-12 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.6.1
2021-07-28 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.6.0
2021-01-10 · diff ↗
0.5.10
2020-05-07 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.5.9
2020-03-23 · diff ↗
0.5.8
2019-12-11 · diff ↗

Show 25 earlier events

0.5.7
2019-10-07 · diff ↗
0.5.6
2019-05-15 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.5.5
2019-02-12 · diff ↗
0.5.4
2019-02-08 · diff ↗
0.5.3
2019-01-31 · diff ↗
0.5.2
2018-09-10 · diff ↗
0.5.1
2018-08-07 · diff ↗
0.5.0
2018-05-16 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.4.1
2017-08-30 · diff ↗
0.4.0
2017-08-29 · diff ↗
0.3.6
2017-04-24 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.3.5
2017-02-03 · diff ↗
0.3.4
2016-11-30 · diff ↗
0.3.3
2016-09-06 · diff ↗
0.3.2
2016-05-14 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.3.1
2016-02-24 · diff ↗
0.3.0
2015-11-28 · diff ↗
0.2.9
2015-10-14 · diff ↗
0.2.8
2015-08-26 · diff ↗
0.2.7
2015-07-31
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-07-31
Total releases: 29 / 11 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 1.3 MB / 8 files
Download size: 2.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Handling and Analyzing Spatio-Temporal Data Processing and Analysis of Tracking Data

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ctmm")

Format

Fleming, C. H., Akre, T., Calabrese, J. M., Cross, P. C., Dong, X., Drescher-Lehman, J., Gurarie, E., Harrison, A., Kranstauber, B., Morato, R. G., Mueller, T., Noonan, M. J., Péron, G., Reineking, B., Safi, K., Wilhite, C. J., Winner, K., & de Paula, R. C. (2025). ctmm: Continuous-Time Movement Modeling (Version 1.3.0) [Computer software]. https://doi.org/10.32614/CRAN.package.ctmm

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ctmm version 1.3.0 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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