R Observatory: Metrics for cp4p version 0.3.6

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

cp4p

0.3.6

Calibration Plot for Proteomics

2packages depend

4.5Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Quentin Giai GianettoFirst published 2015-05-138 releasesCRAN page ↗

Functions to check whether a vector of p-values respects the assumptions of FDR (false discovery rate) control procedures and to compute adjusted p-values.

Install

R (CRAN)Ubuntu (r2u)

install.packages("cp4p", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-cp4p

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 3.1 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

6

Dependencies · direct

Check history

NOTE2026-06-09
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-05-02
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
9 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 100%

Downloads

4.5K

CRAN downloads in the past year

Rank #9,226 · ~12/day · ~377/mo

Releases R versions

Daily download trend is not available in this view yet.

23730 days

1K90 days

4.5K1 year

Compare downloads with other packages →

Also on150 r2u589 bioconda14 c2d4u

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (7)

R >= 3.2.0MESSgraphicsstatsmulttest qvalue limma

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

MSclassifR diagFDR

Code & Tests

Datasets

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (6)

Christophe Bruley