R Observatory: Metrics for convevol version 2.2.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

convevol

2.2.1

Analysis of Convergent Evolution

0packages depend

5.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by C. Tristan StaytonFirst published 2013-08-2710 releasesCRAN page ↗

Quantifies and assesses the significance of convergent evolution using multiple methods and measures as described in Stayton (2015) <DOI: 10.1111/evo.12729> and Grossnickle et al. 2023. Also displays results in various ways.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("convevol", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-convevol

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-convevol

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-convevol

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.6 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

5

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-30
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-06-09
9 OK · 0 NOTE · 4 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
9 OK · 0 NOTE · 3 WARNING · 1 ERROR · 0 FAILURE

Show 2 earlier snapshots

WARNING2026-03-29
13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 74%
Documented parameters: 99%
Return-value docs: 100%
References docs: 92%

Downloads

5.5K

CRAN downloads in the past year

Rank #10,421 · ~15/day · ~460/mo

Releases R versions

Daily download trend is not available in this view yet.

25730 days

92090 days

5.5K1 year

Compare downloads with other packages →

Also on125 r2u31 autocran82 c2d4u

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (6)

R >= 3.5.0apeclustergeiger magick phytools

Imports (0)

none

LinkingTo (0)

none

Suggests (1)

R.rsp

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (2)

Maintainer (1)

C. Tristan Stayton

Author, Maintainer

Authors (2)

C. Tristan Stayton

Author, Maintainer

William Brightly

Author · added in 2.2.0

Listed in earlier versions (1)

William H. Brightly

no longer listed · 2.0.0 to 2.0.1

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.2.1Latest
2024-08-16 · current release · diff ↗
2.2.0
2024-07-08 · diff ↗
R
R 4.4.0 released · 2024-04-24
2.0.1
2023-06-30 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.0.0
2023-03-15 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
1.3
2018-11-04 · diff ↗
1.2
2018-08-20 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1
2017-11-02 · diff ↗

Show 8 earlier events

R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
1.0
2014-12-22 · diff ↗
R
R 3.1.0 released · 2014-04-10
0.1-1
2013-11-15 · diff ↗
0.1
2013-08-27
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-08-27
Total releases: 10 / 13 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 9.1 KB / 2 files
Download size: 1.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Phylogenetics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("convevol")

Format

Stayton, C. T., & Brightly, W. (2024). convevol: Analysis of Convergent Evolution (Version 2.2.1) [Computer software]. https://doi.org/10.32614/CRAN.package.convevol

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for convevol version 2.2.1 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →