conos

Description

Wires together large collections of single-cell RNA-seq datasets, which allows for both the identification of recurrent cell clusters and the propagation of information between datasets in multi-sample or atlas-scale collections. 'Conos' focuses on the uniform mapping of homologous cell types across heterogeneous sample collections. For instance, users could investigate a collection of dozens of peripheral blood samples from cancer patients combined with dozens of controls, which perhaps includes samples of a related tissue such as lymph nodes. This package interacts with data available through the 'conosPanel' package, which is available in a 'drat' repository. To access this data package, see the instructions at <https://github.com/kharchenkolab/conos>. The size of the 'conosPanel' package is approximately 12 MB.

Downloads

Trend: -69.3% (30d vs prior 30d)

CRAN Check Status

installed size is 11.2Mb
  sub-directories of 1Mb or more:
    libs   9.4Mb

Packages suggested but not available for checking:
  'conosPanel', 'org.Mm.eg.db', 'p2data'

installed size is 11.3Mb
  sub-directories of 1Mb or more:
    libs   9.5Mb

Packages suggested but not available for checking: 'conosPanel', 'p2data'

Check History

Packages suggested but not available for checking:
  'conosPanel', 'org.Mm.eg.db', 'p2data'

Packages suggested but not available for checking: 'conosPanel', 'p2data'

Packages suggested but not available for checking: 'conosPanel', 'p2data'

Reverse Dependencies (2)

Dependency Network

Version History