R Observatory: Metrics for codified version 0.3.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

codified

0.3.0

Produce Standard/Formalized Demographics Tables

0packages depend

3.1Kdownloads / year

100.0%test coverage

8/13checks pass

Overview

About

Maintained by Will BeasleyFirst published 2018-09-302 releasesCRAN page ↗GitHub ↗

Augment clinical data with metadata to create output used in conventional publications and reports.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("codified", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("OuhscBbmc/codified")

Development version from OuhscBbmc/codified. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-codified

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-codified

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-codified

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

5NOTE8OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64

Slowest check: 1.4 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.75

100.0%

Coverage · measured lines

100%

Documentation · exports

7

Dependencies · direct

Check history

NOTE2026-07-16
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 232 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

3.1K

CRAN downloads in the past year

Rank #13,905 · ~8/day · ~257/mo

Releases R versions

Daily download trend is not available in this view yet.

20930 days

73490 days

3.1K1 year

Compare downloads with other packages →

Also on120 r2u22 autocran

Repository

GitHub ↗ ouhscbbmc/codified

3Stars

0Forks

3Open issues

0Open PRs

2Releases

109Commits

3Contributors

r-packagereproducible-researchr

109 commits · Last activity 2026-07-02

Stars over time

2023-02-09 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/ouhscbbmc/codified on 2026-08-16.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Automation and maintenance (1)

Dependabot

Lint, format, editor (2)

lintrRStudio project

Show all practices

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (7)

checkmate dplyr kableExtra knitr (>= 1.18.0)rlang tibble tidyr

LinkingTo (0)

none

Suggests (5)

covr readr REDCapR rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Will Beasley

Author, Maintainer

Authors (1)

Will Beasley

Author, Maintainer

Contributors (1)

Peter Higgins

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.3.0Latest
2022-08-12 · current release · diff ↗
unarchivedReturned to CRAN
2022-08-12
archivedRemoved from CRAN
2022-08-08
policy violation On Internet access
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
0.2.0
2018-09-30
R
R 3.5.0 released · 2018-04-23

Package metadata

First published: 2018-09-30
Total releases: 2 / 8 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 380 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("codified")

Format

Beasley, W., & Higgins, P. (2022). codified: Produce Standard/Formalized Demographics Tables (Version 0.3.0) [Computer software]. https://doi.org/10.32614/CRAN.package.codified

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for codified version 0.3.0 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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