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clustree

Visualise Clusterings at Different Resolutions

v0.5.1 · Nov 5, 2023 · GPL-3

Description

Deciding what resolution to use can be a difficult question when approaching a clustering analysis. One way to approach this problem is to look at how samples move as the number of clusters increases. This package allows you to produce clustering trees, a visualisation for interrogating clusterings as resolution increases.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (5)

Dependency Network

Dependencies Reverse dependencies ggraph checkmate igraph dplyr ggplot2 viridis rlang tidygraph ggrepel crosshap scRNAstat CIARA MitoHEAR plotthis clustree

Version History

new 0.5.1 Mar 10, 2026
updated 0.5.1 ← 0.5.0 diff Nov 4, 2023
updated 0.5.0 ← 0.4.4 diff Jun 24, 2022
updated 0.4.4 ← 0.4.3 diff Nov 7, 2021
updated 0.4.3 ← 0.4.2 diff Jun 13, 2020
updated 0.4.2 ← 0.4.1 diff Jan 28, 2020
updated 0.4.1 ← 0.4.0 diff Aug 20, 2019
updated 0.4.0 ← 0.3.0 diff Apr 17, 2019
updated 0.3.0 ← 0.2.2 diff Feb 23, 2019
updated 0.2.2 ← 0.2.1 diff Jul 9, 2018
updated 0.2.1 ← 0.2.0 diff Jul 8, 2018
updated 0.2.0 ← 0.1.2 diff Jun 23, 2018
updated 0.1.2 ← 0.1.1 diff Apr 19, 2018
new 0.1.1 Mar 26, 2018