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cauphy

Trait Evolution on Phylogenies Using the Cauchy Process

v1.0.3 · Oct 1, 2024 · GPL (>= 3)

Description

The Cauchy Process can model pulsed continuous trait evolution on phylogenies. The likelihood is tractable, and is used for parameter inference and ancestral trait reconstruction. See Bastide and Didier (2023) <doi:10.1093/sysbio/syad053>.

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Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies ape robustbase phylolm nloptr pracma foreach doParallel HDInterval cauphy

Version History

new 1.0.3 Mar 10, 2026
updated 1.0.3 ← 1.0.2 diff Sep 30, 2024
updated 1.0.2 ← 1.0.1 diff Nov 28, 2023
updated 1.0.1 ← 1.0.0 diff Sep 18, 2023
new 1.0.0 Sep 11, 2023