R Observatory: Metrics for adapt4pv version 0.2-3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

adapt4pv

0.2-3Package record

Adaptive Approaches for Signal Detection in Pharmacovigilance

0packages depend

4Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Emeline CourtoisCRAN page ↗

A collection of several pharmacovigilance signal detection methods based on adaptive lasso. Additional lasso-based and propensity score-based signal detection approaches are also supplied. See Courtois et al doi:10.1186/s12874-021-01450-3.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("adapt4pv", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-adapt4pv

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-adapt4pv

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-adapt4pv

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2-3

READMENoVignettesNoNEWSYes · 100% structured · does not mention 0.2-3Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 18includes a package overview page
Examples that run: 100%17 run in a plain check
Exported functions with examples: 100%
Documented parameters: 95%
Return-value docs: 100%
Help pages citing references: 28%

How these are measured

Downloads

4K

CRAN downloads in the past year

Rank #7,951 · ~11/day · ~330/mo

Releases R versions

Daily download trend is not available in this view yet.

36530 days

1.2K90 days

4K1 year

Compare downloads with other packages →

Also on88 r2u24 autocran

How downloads are counted

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Installing adapt4pv adds 13 packages (7 with compiled code, 16 MB of source tarballs). Heaviest: data.table 5.7 MB, glmnet 2.7 MB, Rcpp 1.8 MB.

Depends (3)

R >= 3.6.0Matrixglmnet

Imports (4)

speedglm xgboost doParallel foreach

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Emeline Courtois

Maintainer since 0.1.0 (2020)

Ismaïl Ahmed

Author

Hervé Perdry

Contributor

Releases (5)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
unarchivedReturned to CRAN
2023-05-30
0.2-3Latest
record
2023-05-30 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2023-03-20
email to the maintainer is undeliverable
0.2-2
record
2022-05-30 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.2-1
record
2021-09-22 · diff ↗
0.2-0
record
2021-08-05 · diff ↗ ·
removed 1 export
adapt_ridge
R
R 4.1.0 released · 2021-05-18
0.1.0
record
2020-06-24
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-06-24
Total releases: 5 / 6 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.6.0
Bundled data: 160 KB / 1 file
Download size: 195 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("adapt4pv")

Format

Courtois, E., Ahmed, I., & Perdry, H. (2023). adapt4pv: Adaptive Approaches for Signal Detection in Pharmacovigilance (Version 0.2-3) [Computer software]. https://doi.org/10.32614/CRAN.package.adapt4pv

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for adapt4pv version 0.2-3 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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