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WebGestaltR

Gene Set Analysis Toolkit WebGestaltR

v0.4.6 · Jun 1, 2023 · LGPL

Description

The web version WebGestalt <https://www.webgestalt.org> supports 12 organisms, 354 gene identifiers and 321,251 function categories. Users can upload the data and functional categories with their own gene identifiers. In addition to the Over-Representation Analysis, WebGestalt also supports Gene Set Enrichment Analysis and Network Topology Analysis. The user-friendly output report allows interactive and efficient exploration of enrichment results. The WebGestaltR package not only supports all above functions but also can be integrated into other pipeline or simultaneously analyze multiple gene lists.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies dplyr doRNG readr doParallel foreach jsonlite httr rlang svglite igraph whisker apcluster Rcpp WebGestaltR

Version History

new 0.4.6 Mar 10, 2026
updated 0.4.6 ← 0.4.5 diff May 31, 2023
updated 0.4.5 ← 0.4.4 diff Feb 15, 2023
updated 0.4.4 ← 0.4.3 diff Jul 23, 2020
updated 0.4.3 ← 0.4.2 diff Jan 15, 2020
updated 0.4.2 ← 0.4.1 diff Sep 16, 2019
updated 0.4.1 ← 0.4.0 diff Jul 2, 2019
updated 0.4.0 ← 0.3.1 diff Apr 26, 2019
updated 0.3.1 ← 0.3.0 diff Mar 14, 2019
updated 0.3.0 ← 0.1.1 diff Jan 17, 2019
updated 0.1.1 ← 0.1.0 diff May 10, 2017
updated 0.1.0 ← 0.0.9 diff May 1, 2017
updated 0.0.9 ← 0.0.8 diff Apr 25, 2017
updated 0.0.8 ← 0.0.5 diff Mar 7, 2017
new 0.0.5 Feb 25, 2017