R Observatory: Metrics for TopKLists version 1.0.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

TopKLists

1.0.8Package record

Inference, Aggregation and Visualization for Top-K Ranked Lists

1packages depend

3.5Kdownloads / year

–test coverage

11/13flavors OK

Overview

About

Maintained by Bastian PfeiferCRAN page ↗Website ↗

For multiple ranked input lists (full or partial) representing the same set of N objects, the package 'TopKLists' doi:10.1515/sagmb-2014-0093 offers (1) statistical inference on the lengths of informative top-k lists, (2) stochastic aggregation of full or partial lists, and (3) graphical tools for the statistical exploration of input lists, and for the visualization of aggregation results. Note that RGtk2 and gWidgets2RGtk2 have been archived on CRAN. See https://github.com/pievos101/TopKLists for installation instructions.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("TopKLists", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-topklists

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-TopKLists

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-TopKLists

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

2NOTE11OK

Check messages

NOTECRAN incoming feasibilityr-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Maintainer: ‘Bastian Pfeifer <bastian.pfeifer@medunigraz.at>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Michael", "G."),
                      family = "Schimek",
                      role = "aut"),
               person(given = "Eva",
                      family = "Budinska",
                      role = "aut"),
               person(given = "Jie",
                      family = "Ding",
                      role = "aut"),
               person(given = c("Karl", "G."),
                      family = "Kugler",
                      role = "aut"),
               person(given = "Vendula",
                      family = "Svendova",
                      role = "aut"),
               person(given = "Shili",
                      family = "Lin",
                      role = "aut"),
               person(given = "Bastian",
                      family = "Pfeifer",
                      role = c("aut", "cre"),
                      email = "bastian.pfeifer@medunigraz.at"))
as necessary.

CRAN check page ↗

Slowest check: 3.7 min · r-devel-windows-x86_64

Status changes

NOTE11 OK, 2 NOTE2026-06-09
ERROR11 OK, 1 NOTE, 1 ERROR2026-06-08
NOTE9 OK, 5 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.8

READMEYes · 10 wordsVignettesYes · 1 · dynamicNEWSYes · 0% structuredCitation fileNoWebsiteYes

Help pages: 25includes a package overview page
Examples that run: 95%20 run in a plain check · 1 never run
Exported functions with examples: 91%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 60%

Vignettes (1)

Usage of TopKLists PDF

How these are measured

Downloads

3.5K

CRAN downloads in the past year

Rank #13,829 · ~10/day · ~289/mo

Releases R versions

Daily download trend is not available in this view yet.

31130 days

84690 days

3.5K1 year

Compare downloads with other packages →

Also on367 r2u5 autocran

How downloads are counted

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Installing TopKLists adds 55 packages (29 with compiled code, 57 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (1)

R >= 3.0.0

Imports (3)

Hmiscgridgplots

LinkingTo (0)

none

Suggests (4)

knitr RGtk2 gWidgets2 gWidgets2RGtk2

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

epos

How these are counted

Code & Tests

Datasets

People & History

People (from the free-text Author field) (7)

· added in 1.0.8

Maintainer since 1.0.8 (2022), previously Michael G. Schimek (1.0.0 to 1.0.7)

Listed in earlier versions (18)

Show 8 of 18 peopleHide 8 people

Austria